Filter By:

Journal Check one or more journals to show results from those journals only.

Choose more journals

Article type Check one or more article types to show results from those article types only.
Subject Check one or more subjects to show results from those subjects only.
Date Choose a date option to show results from those dates only.

Custom date range

Clear all filters
Sort by:
Showing 1–23 of 23 results
Advanced filters: Author: Valentin Kovalev Clear advanced filters
  • Using structural, functional and spectroscopic investigations of a bacterial inward proton-pumping rhodopsin, Kovalev et al. reveal its molecular mechanism and show how proton wires mediate ion selectivity and direct proton transport through cell membrane.

    • Kirill Kovalev
    • Fedor Tsybrov
    • Valentin Gordeliy
    Research
    Nature Structural & Molecular Biology
    Volume: 30, P: 970-979
  • Rhodopsin genes have been identified in some large double-stranded DNA viruses, but the structure and functions of viral rhodopsins remain unknown. Here authors present crystal structure and characterization of an Organic Lake Phycodnavirus rhodopsin II (OLPVRII) which forms a pentamer and is a weak proton pump.

    • Dmitry Bratanov
    • Kirill Kovalev
    • Valentin Gordeliy
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-13
  • Cysteinyl leukotriene G protein-coupled receptors CysLT1 and CysLT2 regulate pro-inflammatory responses associated with allergic disorders. Here, authors describe four crystal structures of CysLT2R in complex with three dual CysLT1R/CysLT2R antagonists, which shed light on CysLTR ligand selectivity.

    • Anastasiia Gusach
    • Aleksandra Luginina
    • Vadim Cherezov
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-9
  • The Na+-pumping KR2 rhodopsin from Krokinobacter eikastus is a light-driven non-proton cation pump whose mechanism of pumping remains to be understood. Here authors solved crystal structures of the O-intermediate state of the pentameric form of KR2 and its D116N and H30A mutants, which sheds light on the mechanism of non-proton cation light-driven pumping.

    • Kirill Kovalev
    • Roman Astashkin
    • Valentin Gordeliy
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-11
  • S1P5 is a sphingosine-1-phosphate (S1P) receptor implicated in immune and neurodegenerative disorders. Here, authors report a crystal structure of the S1P5 receptor in complex with a selective inverse agonist, revealing an allosteric subpocket and shedding light on inverse agonism in S1P receptors.

    • Elizaveta Lyapina
    • Egor Marin
    • Vadim Cherezov
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-14
  • Crystal structures of the microbial rhodopsin KR2, a recently discovered light-driven sodium pump, reveal the translocation pathway of sodium ions and shed light on the molecular mechanism of ion pumping.

    • Ivan Gushchin
    • Vitaly Shevchenko
    • Valentin Gordeliy
    Research
    Nature Structural & Molecular Biology
    Volume: 22, P: 390-395
  • Nucleocytoplasmic Large DNA Viruses (NCLDV) that infect algae encode two distinct families of microbial rhodopsins. Here, the authors characterise two proteins form the viral rhodopsin group 1 OLPVR1 and VirChR1, present the 1.4 Å crystal structure of OLPVR1 and show that viral rhodopsins 1 are light-gated cation channels.

    • Dmitrii Zabelskii
    • Alexey Alekseev
    • Valentin Gordeliy
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • Here, the authors present four high-resolution structures of SyHR protein from cyanobacterial anion pumps family: chloride and sulfate bound forms and two active state structures. These structures provide insights into the molecular mechanisms of SyHR and cyanobacterial anion pumps in general.

    • R. Astashkin
    • K. Kovalev
    • V. Gordeliy
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-13
  • Proteorhodopsins act as light-driven outward proton pumps mainly at neutral and alkaline pH, however, mirror proteorhodopsins are known to operate only at acidic pH. Here, the authors report the detailed structural and functional characterization of pH mirror proteorhodopsin SpaR as well as its diverse biological roles.

    • Ivan S. Okhrimenko
    • Kirill Kovalev
    • Valentin I. Gordeliy
    ResearchOpen Access
    Communications Chemistry
    Volume: 6, P: 1-16
  • Zabelskii et al. present a structural and functional analysis of the lightdriven proton pump LR (Mac) from the fungus Leptosphaeria maculans. Their findings indicate that the archaeal ancestry of eukaryotic type 1 rhodopsins, and that the archaeal host of the proto-mitochondrial endosymbiont was capable of light-driven proton pumping.

    • Dmitrii Zabelskii
    • Natalia Dmitrieva
    • Valentin Gordeliy
    ResearchOpen Access
    Communications Biology
    Volume: 4, P: 1-12
  • Noble gases are known to interact with proteins and can be good anaesthetics in hyperbaric conditions. This study identifies argon and krypton binding sites on membrane proteins and proposes as a hypothesis that noble gases, by altering protein/lipid contacts, may affect protein function.

    • Igor Melnikov
    • Philipp Orekhov
    • Alexander Popov
    ResearchOpen Access
    Communications Biology
    Volume: 5, P: 1-12
  • Geochemically relevant [C4O10]4- pyramids are the most polymerized high pressure carbonate units, with Mn-, Cd-, Ca- and Ba-based structures reported to date. Here, the authors synthesized an Fe-carbonate featuring [C4O10]4- anions with a predicted high-to-low-spin crossover at unusually high pressure near 95 GPa.

    • Valentin Kovalev
    • Dominik Spahr
    • Elena Bykova
    ResearchOpen Access
    Communications Chemistry
    Volume: 8, P: 1-11
  • Crystal structure predictions have proposed the existence of polymeric H2CO3, but its high-pressure polymorphism has yet to be confirmed experimentally. Here, the authors synthesized single crystals of polymeric H2CO3 in a diamond anvil cell and demonstrated that its structure consists of polymerized \({[{{\rm{CO}}}_{4}]}^{4-}\) tetrahedra forming chains along the c-axis.

    • Dominik Spahr
    • Lkhamsuren Bayarjargal
    • Elena Bykova
    ResearchOpen Access
    Communications Chemistry
    Volume: 8, P: 1-7
  • Yaroshevich et al. present a chemical reaction mechanism of a 35-kDa blue light-triggered photoreceptor, the Orange Carotenoid Protein (OCP). They find that photoactivation critically involves the transient formation of a protonated ketocarotenoid (oxocarbenium cation) state. This study suggests the role of charge-transfer states during OCP photoconversion.

    • Igor A. Yaroshevich
    • Eugene G. Maksimov
    • Mikhail P. Kirpichnikov
    ResearchOpen Access
    Communications Biology
    Volume: 4, P: 1-13