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Showing 151–200 of 784 results
Advanced filters: Author: Yue Tian Clear advanced filters
  • The defect-rich surface of wide-bandgap perovskite solar cells leads to severe interfacial carrier loss and phase segregation. Here, the authors reconstruct the surface through nano-polishing followed by passivation, achieving certified efficiency of 33.1% for perovskite/silicon tandem solar cells.

    • Zheng Fang
    • Bingru Deng
    • Xipeng Xu
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-11
  • Ultraflat metal foils are important for the growth of high quality 2D materials, but their fabrication remains challenging. Here, the authors report a surface-acoustic-wave-assisted annealing method to flatten the surface of commercial Cu foils, leading to the growth of 2D graphene and hexagonal boron nitride with enhanced anti-corrosion properties.

    • Bo Tian
    • Junzhu Li
    • Zheng Liu
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-9
  • Allergic asthma symptoms may be controlled, but currently no effective therapy exist to address the underlying pathology. Here the authors show, using mouse model of adoptive cell transfer, that CD4-CD8- T cells can suppress the function of dendritic cells and T follicular helper cells via Lag3 to provide allergen-specific protection from asthma.

    • Dan Tian
    • Lu Yang
    • Dong Zhang
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-13
  • Lipid metabolism has been linked to iNKT function largely as it impacts processing and presentation of lipids they recognize. Here the authors show that iNKT-intrinsic lipid biosynthesis is important for their function but is impaired in tumors, and its restoration with PPARγ agonist drugs promotes anti-tumor iNKT response.

    • Sicheng Fu
    • Kaixin He
    • Li Bai
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Bioactive cements are widely used in dentistry and medicine. Here, using a variety of novel experimental techniques, the authors uncover the atomic and vibrational contributions to the mechanical toughness of bioactive cement during the setting process.

    • Kun V. Tian
    • Bin Yang
    • G. Neville Greaves
    ResearchOpen Access
    Nature Communications
    Volume: 6, P: 1-10
  • The search for lunar polycyclic aromatics is challenging. Here abundance, aromatic structures and carbon isotope composition of polycyclic aromatics in Chang’E 5 lunar soils are reported, shedding light on the fate of polycyclic aromatics and accretion of organic carbon on the Moon.

    • Guangcai Zhong
    • Xin Yi
    • Gan Zhang
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • In a phase 1 trial, pediatric or adult patients with T-ALL who received CD5-targeted CAR-T cell therapy using cells from previous or newly matched donors showed an encouraging clinical response rate, with some severe adverse events that required attention and effective management.

    • Jing Pan
    • Yue Tan
    • Xiaoming Feng
    Research
    Nature Medicine
    Volume: 31, P: 126-136
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • There’s an emerging body of evidence to show how biological sex impacts cancer incidence, treatment and underlying biology. Here, using a large pan-cancer dataset, the authors further highlight how sex differences shape the cancer genome.

    • Constance H. Li
    • Stephenie D. Prokopec
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-24
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • In somatic cells the mechanisms maintaining the chromosome ends are normally inactivated; however, cancer cells can re-activate these pathways to support continuous growth. Here, the authors characterize the telomeric landscapes across tumour types and identify genomic alterations associated with different telomere maintenance mechanisms.

    • Lina Sieverling
    • Chen Hong
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

    • Matthew H. Bailey
    • William U. Meyerson
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-27
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • Integrative analyses of transcriptome and whole-genome sequencing data for 1,188 tumours across 27 types of cancer are used to provide a comprehensive catalogue of RNA-level alterations in cancer.

    • Claudia Calabrese
    • Natalie R. Davidson
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 129-136
  • Whole-genome sequencing data from more than 2,500 cancers of 38 tumour types reveal 16 signatures that can be used to classify somatic structural variants, highlighting the diversity of genomic rearrangements in cancer.

    • Yilong Li
    • Nicola D. Roberts
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 112-121
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • Some cancer patients first present with metastases where the location of the primary is unidentified; these are difficult to treat. In this study, using machine learning, the authors develop a method to determine the tissue of origin of a cancer based on whole sequencing data.

    • Wei Jiao
    • Gurnit Atwal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Many tumours exhibit hypoxia (low oxygen) and hypoxic tumours often respond poorly to therapy. Here, the authors quantify hypoxia in 1188 tumours from 27 cancer types, showing elevated hypoxia links to increased mutational load, directing evolutionary trajectories.

    • Vinayak Bhandari
    • Constance H. Li
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • In this study the authors consider the structural variants (SVs) present within cancer cases of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium. They report hundreds of genes, including known cancer-associated genes for which the nearby presence of a SV breakpoint is associated with altered expression.

    • Yiqun Zhang
    • Fengju Chen
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

    • Yulia Rubanova
    • Ruian Shi
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Methods to stratify patients according to mortality risk are essential to allocate limited heath resources during the COVID-19 crisis. Here, using machine learning methods, the authors present a mortality risk prediction model for COVID-19 that uses patients’ clinical data on admission to stratify patients by mortality risk.

    • Yue Gao
    • Guang-Yao Cai
    • Qing-Lei Gao
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Evolution of accretion disk and corona during outbursts in black hole binary systems is still unclear. Here, the authors show spectral analysis of MAXI J1820+070 and propose a scenario of a dynamical corona to explain the evolution of the reflection fraction observed by Insight-HXMT.

    • Bei You
    • Yuoli Tuo
    • Yue Zhu
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-11
  • The Hippo signalling pathway is commonly mutated across cancer types. Here, the authors identify 85 loss-of-function missense mutations within Hippo signalling genes and highlight the mechanisms underpinning mutations in MOB1 and NF2.

    • Han Han
    • Zhen Huang
    • Wenqi Wang
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-18
  • Primary biliary cholangitis is an autoimmune liver disease. Here, the authors show that variants in interleukin genes which potentially deregulate their expression are associated with this condition, and suggest that the IL21 signalling pathway may have a role in disease aetiology.

    • Fang Qiu
    • Ruqi Tang
    • Xiong Ma
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-8
  • A genome-wide association study including over 76,000 individuals with schizophrenia and over 243,000 control individuals identifies common variant associations at 287 genomic loci, and further fine-mapping analyses highlight the importance of genes involved in synaptic processes.

    • Vassily Trubetskoy
    • Antonio F. Pardiñas
    • Jim van Os
    Research
    Nature
    Volume: 604, P: 502-508
  • Multiblock copolymers (MBCPs) comprising polyester and polyacrylate segments offer an efficient strategy for enhancing the performance of polyester and polyolefin blends but synthesis and structural modification of these MBCPs remains challenging. Here, the authors propose a method for synthesizing MBCPs via the switchable polymerization of epoxides, cyclic anhydrides, and acrylates using a dinuclear Co-complex.

    • Xiang-Yu Fu
    • Tian-Jun Yue
    • Wei-Min Ren
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • ARF4 GTPase activity is needed for vesicular trafficking for multiple RNA viruses. Blocking ARF4 using specific peptides redirects viral progeny to lysosomal degradation and decreases influenza and Zika virus infection in mice.

    • Ming-Yuan Li
    • Kao Deng
    • Cheng-Feng Qin
    Research
    Nature Microbiology
    Volume: 10, P: 710-723
  • Myocardial substrate metabolism in cardiac hypertrophy or heart failure shifts from fatty acid oxidation to a greater reliance on glycolysis. Here, the authors show that KLF7 can simultaneously regulate key enzymes in glycolysis and fatty acid oxidation to mitigate metabolic imbalance during cardiac hypertrophy.

    • Cao Wang
    • Shupei Qiao
    • Weiming Tian
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-18
  • Non-natural photobiocatalysis is attractive but usually involves UV light activation or the formation of electron donor–acceptor complexes. Now direct visible-light excitation of flavin-dependent ene-reductases allows stereocontrolled intermolecular radical hydroarylation of alkenes initiated by single-electron oxidation.

    • Beibei Zhao
    • Jianqiang Feng
    • Xiaoqiang Huang
    Research
    Nature Catalysis
    Volume: 6, P: 996-1004
  • The SPT-ORMDL complex is tightly regulated by cellular sphingolipid levels, but the sphingolipid sensing mechanism is unknown. Here, the authors elucidate the molecular basis of ceramide sensing by the human SPTORMDL complex for establishing sphingolipid homeostasis.

    • Tian Xie
    • Peng Liu
    • Xin Gong
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-14
  • Many clear cell renal cell carcinoma (ccRCC) patients do not respond or develop resistance to tyrosine kinase inhibitors, such as Sunitinib. Here, the authors perform a proteogenomics analysis of Chinese ccRCC patients treated with Sunitinib and develop a multi-omics classifier to distinguish responders from non-responders.

    • Hailiang Zhang
    • Lin Bai
    • Chen Ding
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-21
  • Gene isoforms are quantified with a machine learning method that optimally integrates long and short sequencing reads.

    • Haoran Li
    • Dingjie Wang
    • Kin Fai Au
    ResearchOpen Access
    Nature Biotechnology
    P: 1-13