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Showing 1–8 of 8 results

Advanced filters: Author: Zongyang Yang Clear advanced filters

Quality assessment of RNA 3D structure models using deep learning and intermediate 2D maps

RNArank leverages deep learning and intermediate 2D maps to accurately assess RNA 3D structure quality, providing a robust tool for reliable RNA structure modeling and analysis.

Xiaocheng Liu
Wenkai Wang
Jianyi Yang
ResearchOpen Access21 Jan 2026
Communications Biology

P: 1-11
trRosettaRNA: automated prediction of RNA 3D structure with transformer network

Here, authors develop trRosettaRNA, a deep learning-based approach for predicting RNA 3D structures. Blind tests demonstrate that the automated predictions compete effectively with top human predictions on natural RNAs.

Wenkai Wang
Chenjie Feng
Jianyi Yang
ResearchOpen Access09 Nov 2023
Nature Communications

Volume: 14, P: 1-13
Efficient generation of mouse models of human diseases via ABE- and BE-mediated base editing

CRISPR-based base editors allow for single nucleotide genome editing in a range of organisms. Here the authors demonstrate the in vivo generation of mouse models carrying clinically relevant mutations using C→T and A→G editors.

Zhen Liu
Zongyang Lu
Xingxu Huang
ResearchOpen Access14 Jun 2018
Nature Communications

Volume: 9, P: 1-8
The trRosetta server for fast and accurate protein structure prediction

The trRosetta server, a web-based platform for fast and accurate protein structure prediction, is powered by deep learning and Rosetta. This protocol includes procedures for using the web-based server as well as the standalone package.

Zongyang Du
Hong Su
Jianyi Yang
Protocols10 Nov 2021
Nature Protocols

Volume: 16, P: 5634-5651
Base editing with a Cpf1–cytidine deaminase fusion

A new fusion protein enables precise editing of single bases in A/T-rich regions of the human genome.

Xiaosa Li
Ying Wang
Jia Chen
Research19 Mar 2018
Nature Biotechnology

Volume: 36, P: 324-327
Automatic assessment of adverse drug reaction reports with interactive visual exploration

Zongyang Gao
Yu Yang
Liang Zhou
ResearchOpen Access26 Apr 2022
Scientific Reports

Volume: 12, P: 1-11
Attain insensitivity to chlorine ions in magnesium alloys by impeding the diffusion process

Yuyang Chen
Guodong Fan
Xiaoqin Zeng
ResearchOpen Access13 Jan 2024
npj Materials Degradation

Volume: 8, P: 1-12
A python code for automatic construction of Fischer plots using proxy data

Daming Yang
Yongjian Huang
Chengshan Wang
ResearchOpen Access18 May 2021
Scientific Reports

Volume: 11, P: 1-13