Main

The Indonesian island of Sulawesi was formed by the collision of the Eurasian Plate, the Indo-Australian Plate and the Pacific Plate16. In the island’s southwestern peninsula, this complex tectonic history resulted in the formation, during the Miocene, of an elongate north-to-south trending basin (the Walanae Depression) that is bounded on both sides by a major fault system oriented in the same direction, the Walanae Fault Zone17. Around the Pliocene–Pleistocene transition, the basin extension reversed to an east–west compressional regime that led to basin inversion18. The Sengkang Anticline forms the surface expression of a reverse fault17,19 generated during this phase (Extended Data Fig. 1). The regressive basin infill sequence, the Walanae Formation, is 1,800 m thick as exposed in the Sengkang Anticline19.

The uppermost stratigraphic unit of the Walanae Formation is the deltaic Beru Member (modern Indonesian spelling Berru), which is characterized by an alternation of water-laid sandstones, conglomerates and silty-clay deposits14,19. The Beru Member has been further subdivided into a lower Sub-Unit A, which is dominated by fine-grained lagoonal and fluviodeltaic clastic deposits, and an upper Sub-Unit B, characterized by coarse-grained fluviatile and estuarine clastic deposits14,19. Vertebrate fossils occur primarily in the coarse-grained sedimentary layers of the Beru Member, but have also been found in fine-grained floodplain and estuarine deposits14,19. The fossil beds of Sub-Unit A are estimated to be Late Pliocene to Early Pleistocene in age, whereas an 18-m-thick sequence pertaining to the younger Sub-Unit B, outcropping near Talepu, ranges from about 100 ka near the top to at least 194 ka towards the base14. Fossils of extinct fauna occur right at the bottom of Sub-Unit A (defined as the first fluviatile sandstone layer), including elements attributed to a large suid, Celebochoerus heekereni, and small-bodied proboscideans19.

Calio (4° 20′ 8′′ S, 120° 00′ 48.3′′ E) is located at 57 m above sea level near the village of Ujung (Lilirilau district) in the Soppeng Regency (Fig. 1 and Extended Data Figs. 1 and 2). It is situated some 2.3 km east of the Walanae River and around 36 m above its active floodplain. A series of fluviatile pebbly sandstones belonging to the Beru Member Sub-Unit B of the Walanae Formation is exposed at the ground surface at this site over an area of about 63,000 m2. Previous studies had interpreted these subhorizontally bedded, coarse-grained fluvial deposits as ancient river terraces of the Walanae River20,21,22, with the earliest of these ‘terrace fills’ deemed to be at most 50 ka (ref. 22). However, subsequent work has revealed that exposures of these strata adjacent to the Walanae River near Calio represent the uplifted upper part of the regressive basin-fill sequence (Beru Member Sub-Unit B of the Walanae Formation)14,19. Sub-Unit A of the Beru Member is better exposed further to the east in the west-dipping west flank of the Sengkang Anticline19. The Beru Member Sub-Unit B deposits had long been associated with surface-collected lithic artefacts recovered from the same area21. However, it was not until 2016 that culturally modified stones were shown conclusively to be present in situ within these fluviatile layers, with the earliest lithic artefacts dating to at least 194 ka at Talepu14.

Fig. 1: Map of the study area.
figure 1

a, The location of Sulawesi within the Wallacean archipelago (Wallacea)—the zone of oceanic islands between the Asian and Australian continental regions (Sunda and Sahul, respectively). MSL, mean sea level. b, The southwestern peninsula of Sulawesi, showing the locations of the Talepu (1) and Calio (2) sites on opposite sides of the Walanae River. Sources of map data: General bathymetric maps (https://www.gebco.net/data_and_products/gridded_bathymetry_data/); DEMNAS Badan Informasi Geospasial (https://tanahair.indonesia.go.id/demnas/#/demnas).

The Calio site first drew attention when a stone artefact (a chert flake denoted artefact 1) was found embedded in a heavily cemented conglomerate with subhorizontal bedding plane exposed on the ground surface in an agricultural field (Fig. 2a and Extended Data Fig. 3g). Systematic excavations were carried out in these Beru Member Sub-Unit B deposits in 2019 and 2021–2022 (Extended Data Fig. 2), targeting an area on an east-northeast–west-southwest trending ridge. In 2019, we opened a total of six contiguous 1 m2 excavation units (denoted squares B1U1 to B1U6) using arbitrary 10-cm-thick intervals (spits) (Fig. 3 and Extended Data Fig. 3a). The first square, B1U1, was initiated at the find site of artefact 1. An additional nine 1 m2 units (B2U1 to B2U3, B3U1–B3U3 and B4U1–B4U3) were placed on the west side of the previously excavated units in 2021–2022. These excavations revealed an up to 1.4-m-thick sequence of fluviatile deposits (Fig. 3 and Extended Data Figs. 2e and 3a,b) consisting of crudely bedded, poorly sorted and coarse pebbly sandstone, capped by a layer of extremely hard, 15–25-cm-thick conglomerate that had been cemented by calcium carbonate (layer 2). The coarse clastic deposits consist primarily of weathered volcanic rock fragments, but also contain chert/silicified limestone pebbles and siltstone and claystone rip clasts, whereas the fine-grained sandy fraction consists of volcanic rock fragments and minor feldspar, quartz and pyroxene crystals. Pebbles and grains are subangular to rounded. Layer 2 has an average clast diameter of granule size with a few larger pebbles with a maximum diameter of around 30 mm. A Celebochoerus maxilla with dentition (Fig. 3 (F1)) was excavated 30 cm below the ground surface at the bottom of this very coarse sandstone (square B1U1) (Extended Data Fig. 4). The fossilized bone tissue of the maxilla is poorly preserved and partly dissolved; however, the worn molars in the left and right tooth rows are in excellent condition, exhibiting no signs of fluvial wear, suggesting that this particular fossil was not reworked from older strata. Aside from this isolated suid element, remains of terrestrial mammals comprised a tooth fragment from a juvenile proboscidean recovered from square B3U1 at a depth of 30–40 cm. Other excavated fossil fauna included a crocodile tooth and several teeth of small-sized sharks (possibly reworked or brackish/freshwater species). A small number of indeterminate waterworn fossil bone fragments was also found dispersed throughout the deposit, as were irregular discontinuous carbonate concretions.

Fig. 2: Stone artefacts recovered from Early Pleistocene deposits at Calio.
figure 2

a, Artefact 1: a large chert flake discovered partially exposed on the surface in a heavily cemented conglomerate. A black linear mineral stain marks the boundary between the exposed part of the flake and the portion embedded in the sandstone. b, Artefact 2: a medium-sized retouched flake struck from a core made from brecciated chert. The arrows indicate the direction of retouch scars across the dorsal face. c, Artefact 3: a small flake struck from a water-rolled chert cobble. d, Artefact 4: a small flake with moderate taphonomic (that is, non-cultural) flaking to both faces (it is broken diagonally). e, Artefact 5: the proximal end of a large flake broken by weathering. f, Artefact 6: a medium-sized redirecting flake struck onto a relatively flat cortical surface of a water-worn chert cobble. g, Artefact 7: a heavily abraded flake with moderate to heavy taphonomic flaking to both faces. Scale bars, 10 mm.

Fig. 3: Plan and stratigraphic sections of the Calio excavation.
figure 3

Layer 1 is a dark brown topsoil with a sandy clay texture (maximum thickness of >40 cm in B1U3). Layer 2 is a grey conglomerate rock composed of tightly cemented sand and gravel containing various rock types, along with stone artefacts and extinct fossil fauna. This conglomerate layer covers almost the entire surface of the excavation units, except for squares B1U5 and B1U6. Layers 3a and 3b share similarities in both colour and texture, consisting of brown, dark brown and yellowish-brown sandy gravel layers with tabular cross-bedding, but moderately cemented. Layer 4 is similar to layer 2, a conglomerate sediment, but it is only found in a few excavation units, particularly squares B1U6 and B1U2. This layer has a thickness of only about 5–10 cm and appears discontinuous, reappearing in other units, giving it an intercalated appearance. Layer 5a is dark brown with a sandy gravel texture. At the base of this layer, layer 5b consists of yellowish-brown sandy intercalations, contrasting in colour with the overlying layer but sharing the same sandy gravel texture. Layer 5c has a thickness of only 2–12 cm. At the base of layer 5b there is a layer resembling the conglomerate with similar characteristics, but it was not further excavated due to its extreme hardness. The deepest stone artefact (artefact 6; A6) was excavated from layer 3b at a depth of 56 cm in square B1U2. F1, the Celebochoerus maxilla dated using US–ESR.

In total, seven flaked stone artefacts (Fig. 3 (A1–A7)) were recovered in situ within the Beru Member Sub-Unit B sandstone at Calio (Fig. 2a–g, Extended Data Figs. 2e and 3c–f and Supplementary Information). The artefacts were found at different depths and in two distinct sedimentary layers (layers 2 and 3b; Fig. 3). As noted above, one artefact (artefact 1) was embedded in the hardened cap layer (layer 2) at the modern ground surface in square B1U1 (Extended Data Fig. 3b,g). The stratigraphically lowest specimen (artefact 6) was recovered from layer 3b, approximately 56 cm below the surface in square B1U2 (Extended Data Figs. 2e and 3a–c). The artefacts are all lightly to heavily abraded and have sustained mechanical edge-flaking from fluvial transport, with these taphonomic scars showing contrasting amounts of abrasion on three artefacts. All stone artefacts are made of chert, alternately known as silicified limestone in some of the related literature14. This source material is abundantly present among the naturally occurring pebbles, but the stone artefacts differ statistically by their larger size compared with unmodified pebble-sized clasts (n = 179; chert/silicified limestone, 83.2%; jasper, 8.9%; quartz, 5.6%; volcanics, 2.2%) excavated from the same fluvial sandstone deposits (Supplementary Information). An unpaired t-test indicates that the maximum dimension of the artefacts, an attribute measured independently from the technological length (which is measured along the percussion axis), is significantly longer than that of the natural pebbles (mean ± s.d.: 41.3 ± 16.0 mm versus 18.5 ± 9.1 mm; t184 = 6.34, P < 0.0001). Similarly, there is a significant difference between the mean second longest measured dimension for both groups, with the artefacts (28.3 ± 11.9 mm) again being larger on average than the pebbles (11.9 ± 6.5 mm; t184 = 6.48, P < 0.0001) (Supplementary Fig. 8). These results suggest that the stone artefacts were produced by hominins outside the Calio site and carried there for use as tools, further underlining the anthropogenic origin of these objects. It is also possible that some or all artefacts could have been eroded out of riverbanks by laterally migrating fluvial channels, and may therefore be older than the layers in which they were found.

The flakes were struck by the hard-hammer freehand percussion technique and range from 21.9 to 60.1 mm long along the percussion axes. Cortical surfaces were present on four flakes, and the nature of the cortex suggests that the stones targeted for flaking derived from local riverbeds. The orientation of dorsal flakes scars shows predominately unidirectional or, in one case (artefact 5), cross-axis reduction. Flakes were struck from relatively steep platforms (66.0 ± 6.8°, n = 6) by blows delivered from 2.6 to 19.7 mm from the core edge. Six flakes were struck from single-facet platforms, indicating rotation of the core during reduction. In one case (artefact 6), the core was rotated and the flake was struck from an adjoining face, removing a former platform surface. The previous flakes were struck at a steep angle from a cortical platform. The platform attributes on another flake (artefact 5) indicate that it was struck from a bifacial core edge. One artefact (artefact 2), a Kombewa flake23, was removed from the ventral surface of a larger flake and apparently then retouched unifacially to the dorsal surface along one edge. On another artefact (artefact 3), the radius of curvature on the single-facet platform suggests that it was also struck from a larger flake. The reduction of large flakes into smaller flakes, which were themselves retouched, suggests that a two-step reduction process was sometimes used to reduce the natural chert cobbles into suitably-sized tools. The evidence for reduction of cores-on-flakes, frequent core rotation and understanding of hard-hammer fracture mechanics attests to expert technical knowledge within the context of a straightforward, ‘least effort’ approach to toolmaking24.

We used palaeomagnetic dating and US–ESR dating to constrain the age of the artefact-bearing sediments at Calio. Concerning the former, a 12-m-thick sequence of coarse clastics alternating with sandy siltstones, which we interpret as a braided river sequence, was reconstructed by combining other outcrops in the vicinity of the Calio excavation site, including a 1-m-deep test-pit 335 m to the east of the latter at Beru-Bulu Carulle (Fig. 4 and Extended Data Figs. 1d and 5). Five oriented block samples (Sp1–Sp5) were taken at four finer-grained levels within this subhorizontal sequence, representing Beru Member Sub-Unit B (Extended Data Fig. 1d). An additional three samples were obtained from the Beru Member Sub-Unit A as exposed in the west-dipping west flank of the Sengkang Anticline, as well as six samples from the upper part of the underlying marine Samaoling Member (Extended Data Figs. 1d and 5). One sample (Sp4) was damaged during transport and could not be analysed further. The four samples collected in the immediate vicinity of the Calio excavation site all returned reliable reverse magnetic polarities (Fig. 4 and Extended Data Tables 1 and 2). Results indicate that the Beru Member Sub-Unit B sequence exposed near Calio (Fig. 4) should have a minimum age older than the boundary between the Brunhes Chron and Matuyama Chron at 773 ka (ref. 25). Some 130 m lower in the stratigraphic sequence, four samples taken at the base of the Beru Member Sub-Unit A also provided three reverse and one intermediate magnetic polarities (Extended Data Fig. 5 and Extended Data Tables 1 and 2). However, the large gap in data between the sampled intervals prohibits further correlations with the geomagnetic polarity time scale.

Fig. 4: The stratigraphic and palaeomagnetic context of the Calio site.
figure 4

Paleomagnetic results plotted along the stratigraphy of the Calio excavation site and Beru-Bulu Carulle test-pit 335 m to the east, as well as adjacent outcrops along the main road in the vicinity of Beru-Bulu Carulle (Extended Data Fig. 1d). The zero-elevation reference level is the datum used at the Calio excavation site. Four samples taken within a stratigraphic interval of 12 m all returned reverse (R) magnetic polarities. One sample (Sp4) was broken in transit and could not be analysed further. MAD, mean angular deviation; NA, not available. The horizontal error bars indicate the 95% confidence limit of the mean directions (α95) (Extended Data Table 2).

A palaeomagnetism age of older than 773 ka for the artefact-bearing layers at Calio is confirmed by US–ESR dating of two fossil teeth (left P4 and left M3) from the Celebochoerus maxilla (Extended Data Fig. 4) excavated from the base of layer 2 (Extended Data Tables 3 and 4 and Supplementary Information). The assumption of immediate and unchanged diffusion of uranium into the teeth at burial (EU model) has been criticized in the literature for its inaccuracy26. Thus, no scientifically relevant minimum age can be calculated. Alternatively, a maximum age of 2.1 Ma can be estimated, assuming that the uranium diffusion took place rapidly and at the time of the apparent U-series age. By doing so, we approximate a maximum age for the fossil and refer to the diffusion pattern as a closed-system U-series (CSUS). A more nuanced approach involves analysing uranium diffusion to ensure a comprehensive integration of uptake into the age calculation. Using the US–ESR approach, whereby uranium uptake is modelled using a diffusion coefficient (p; Extended Data Fig. 6), we infer a likely age for the Celebochoerus maxilla of 1.26 ± 0.22 Ma (Extended Data Tables 3 and 4), with individual ages of 1.20 ± 0.18 Ma for the M3 and 1.43 ± 0.21 Ma for the P4 (1σ). The high uranium content in the M3 dentine could potentially impact the ESR dose recovery, resulting in a younger age compared with the true depositional age (Extended Data Fig. 6). The negative impact of large amounts of uranium in dental tissues has been observed in other Indonesian fossils27. This phenomenon could be a result of high alpha emissions, although the exact cause is unknown28,29. In any case, it is generally only detrimental for ESR dating when uranium is concentrated in the enamel. As the uranium content is low (<1 ppm) in this part of the Celebochoerus teeth, this is unlikely to be a problem at Calio29.

Overall, the US–ESR-modelled results provide the most accurate age for fossil deposition and align well with the palaeomagnetism results. The deposits that yielded the stone artefacts at Calio most likely correspond in age to the reverse polarity interval between the Olduvai and Jaramillo Subchrons, broadly bracketing these layers to between 1.787 Ma and 1.070 Ma (ref. 25). Although a post-Jaramillo age (<990 ka)25 cannot be ruled out entirely considering the associated age error, the US–ESR results from the fossil teeth suggest that, statistically, the probability of a younger age is exceedingly low. As noted, the Celebochoerus maxilla was found at the base of layer 2 and therefore stratigraphically above the stratum (layer 3b) that yielded the lowermost stone artefact (Extended Data Figs. 2e and 3b,c). Thus, the modelled US–ESR average age (Supplementary Table 2) of 1.26 ± 0.22 Ma for the dated fossil provides a minimum age of 1.04 Ma, and potentially up to 1.48 Ma, for the earliest proxy evidence for hominins at this site.

In summary, our findings demonstrate that in situ stone artefacts are present in fluvial sandstone layers of the Beru Member Sub-Unit B at Calio, and are therefore far earlier in age than what was formerly the oldest reported archaeological indication of hominins on Sulawesi (stone artefacts dated to about 194 ka at Talepu14). With a minimum age of 1.04 Ma, it now seems possible that hominin occupation of this large Wallacean island preceded that of Luzon6 to the north and is at least as old as, and potentially earlier than, the hominin presence on Flores5,30 to the south. However, precisely when hominins first crossed to Sulawesi remains an open question, as does the taxonomic affinity of the colonizing population.

Methods

Palaeomagnetic analysis

Oriented block samples of approximately 10 × 10 × 10 cm3 each were carved with a sharp non-magnetic knife from fresh excavation baulks (samples Sp1 and Sp2) or from field exposures for palaeomagnetic analysis (Sp3–Sp14). Strike and dip were measured using a Brunton Compass corrected for local declination. Owing to the scarcity of suitable consolidated fine-grained layers, some samples were obtained from outcrops located up to 430 m from the measured section along the main Cabenge–Pampanua road (Extended Data Fig. 1). This stratigraphic section was originally recorded in 1991, when the outcrops along the road were still freshly exposed by construction works19. Five samples (Sp1–Sp5) were taken west of the Bulu Cepo Fault in subhorizontal to slightly west-dipping bedding, including two samples from the Calio excavation (Sp2 and Sp3), one sample from an outcrop along an erosional gully 74 m northwest of the Calio excavation (Sp1), one sample from the Beru (modern Indonesian spelling Berru) test-pit at 328 m eastsoutheast of the Calio Excavation (Sp4) and the fifth sample (Sp5) from an outcrop on the opposite side of the road 17 m south of the Beru test-pit. Samples Sp6 to Sp14 were obtained from steeply west-dipping layers east of the Bulu Cepo Fault. For those block samples taken at a distance from the road section, the approximate stratigraphic position relative to the section recorded in 1991 was extrapolated using the measured strike and dip of 258°/60° (Extended Data Fig. 1d).

The carved samples were tightly packed in plastic and shipped to Bandung, Java, where they were further analysed at the Palaeomagnetism Laboratory of the Centre for Geological Survey (CGS). One sample (Sp4) arrived in a deteriorated condition and could not be analysed further. Of the remaining block samples, three to four 1 × 1 × 1 cm3 subsamples (denoted specimens and labelled sequentially) were carved from each, or, in cases in which the samples were not well consolidated, plastic cubes of the same dimensions were pressed into the sediments. Subsamples were stored in magnetically shielded containers to minimize viscous remanent acquisition of any modern magnetic field components. Care was taken to keep samples moist until palaeomagnetic measurements were made at the CGS Palaeomagnetic Laboratory.

Of all the palaeomagnetic block samples collected, three sequentially numbered subsamples (specimens) were then step-wise demagnetized with a Schonsted USA GSD-1 series alternating-field demagnetizer (AFD), at intervals of 2.5–5 mT, up to peak fields of 60–100 mT. If a fourth specimen was available, it was also step-wise demagnetized by thermal demagnetization (TD) using a magnetic measurement thermal demagnetizer MM80 series, at intervals of 100–25 °C, with a temperature up to 800 °C. Magnetic remanence directions and intensities were determined using a dual spinnermagnetometer from AGICO (model JR-6A). Most of the samples were influenced by a secondary magnetization; however, this could be easily removed. Characteristic remanent magnetizations (ChRMs) were isolated throughout stepwise AFDs at 20–40 mT in level, above which most samples were completely demagnetized (Extended Data Fig. 7). Meanwhile, ChRMs were isolated through stepwise TDs at 200–300 °C to 550–600 °C, above which most samples were completely demagnetized (Extended Data Table 1 and Extended Data Fig. 8). The temperature range for ChRM indicates that magnetite is the dominant carrier of remanence. The ChRM directions obtained by TD are consistent with those obtained by AFD (Extended Data Table 1).

The ChRM is either trending to the origin of the orthogonal vector projections or is defined as the mean of vectors which are stable. Fisher’s statistic was used to establish the mean direction of primary magnetism (Extended Data Table 2). The primary magnetic direction was determined from at least the last four to five plot points using principal component analysis31, with the mean maximum angular deviation set at <15° using PuffinPlot software32 and IAPD 2000 (ref. 33). Magnetic polarities are defined from the virtual geomagnetic pole (VGP) where a normal polarity represents positive (Northern Hemisphere) VGP latitudes and a reverse polarity represents negative (Southern Hemisphere) VGP latitudes. Intermediate or transitional polarity fields are defined as those with VGP latitudes between 45° N and 45° S. Each VGP is calculated using the unit vector mean of the three to four directions observed at each sampling level.

Extended Data Fig. 9 shows the VGP plot of the 13 samples from the Calio excavation site and the samples taken further east. Twelve of the VGPs cluster in the Southern Hemisphere around the southern part of South Pacific Ocean and Antarctica, and all exhibit a reverse polarity. One sample (Sp9) has an intermediate or transitional VGP latitude of 38.8° S, while another sample (Sp7) has a VGP latitude on the Northern Hemisphere (normal polarity).

The four samples associated with the subhorizontal fluvial beds of the Calio excavation site and Beru-Bulu Carulle test-pit west of the Bulu Cepo Fault all have a reverse polarity. This suggests that the sampled horizons have a minimum age of 773 ka, which corresponds to the Brunhes–Matuyama boundary25. On the basis of the US–ESR dating of the two Celebochoerus teeth, the approximately 12-m-thick sequence sampled at the excavation site and surrounding locales is more likely to pertain to the reverse magnetic interval below the Jaramillo Subchron (1,070–990 ka)25.

Three samples taken from the steeply west-dipping flank exposed at Ciangkange (Sp6, Sp10–11) also have a reverse polarity, while one sample (Sp9) shows an intermediate polarity (Extended Data Fig. 5). This interval is probably still within the Matuyama Chron. The normal polarity of sample Sp7 further down the sequence could be correlated to the Olduvai Subchron dated to 1.948–1.787 Ma (ref. 25), but this would need to be confirmed by a higher sampling density in the stratigraphy.

U-series dating

U-series data were obtained by first sectioning a part of each of the two Celebochoerus fossil teeth using a high-precision diamond blade (300 μm width) to expose both dental tissues. The exposed surface of each sample was then polished to >10 μm smoothness to provide a clean ablation surface. U-series measurements were undertaken by laser-ablation multi-collector-inductively coupled plasma mass spectrometry (MC-ICPMS) at the Geoarchaeology and Archaeometry Research Group (GARG) Biomics facility at Southern Cross University. Laser ablation was performed using a New Wave Research 193 nm Arf excimer laser, equipped with a TV2 cell. Thorium (230Th, 232Th) and uranium (234U, 235U, 238U) isotopes were measured on the Thermo Neptune XT MC-ICPMS system mounted with jet sample and x-skimmer cones. All five isotopes were collected in static mode, with both 234U and 230Th collected in the ion counter and CDD respectively. Helium flow rate (850 ml min−1), nitrogen (6 ml min−1) and ICP-MS parameters were tuned with NIST610 element standard to derive a 232Th/238U ratio of greater than 0.85 and therefore minimizing differences in fractionation between Th and U. Tuning was achieved with a fluence of about 6.5 J cm−2, pulse rate of 100 Hz, spot size of 120 μm and scan speed of 5 μm s−1, yielding 4.40 V of 238U and 3.85 V of 232Th on NIST610.

The Celebochoerus maxillary teeth were ablated using rasters of ~5 min each (twice ~800 μm long). Before and after each sample, NIST612, MK10 and MK16 standards were measured34, as well as a fossil rhinoceros tooth with known isotopic ratios35. The 234U/238U and 230Th/238U isotopic ratios were corrected for elemental fractionation and Faraday cup/SEM yield by comparison with MK10 coral for which ratios were previously characterized internally by solution analysis34. Detrital-corrected 230Th-U ages were calculated for each analysis using IsoPlotR36 and UThwigl37 with an assumed detrital (230Th/232Th) activity ratio of 0.8 ± 0.8 (ref.38). Concentrations of U and Th were determined using NIST612 glass as a calibration standard. Background subtraction, concentration quantification and ratio corrections were performed using Iolite software39. The corrected 234U/238U and 230Th/238U isotope ratios for the secondary standard (MK16 coral) within error of the value were determined by solution analysis. The rhinoceros tooth was used as a control for matrix effect.

Little to no detrital thorium was measured within the dental tissues, except at the surface and along cracks containing sediment intrusion (Extended Data Table 3). For the measurements, we avoided macroscopically visible cracks and obvious altered zones. The distribution of uranium across the dentine and the enamel is characteristic of the uranium diffusion pattern described in ref. 40. Uranium diffused from the pulp cavity across the dentine and accumulated at the enamel–dentine junction before diffusing slowly into the enamel crystal structure. This translates into a large variability of uranium content at the interface of the two tissues (Extended Data Table 3). In summary, the Celebochoerus teeth from Calio exhibit varying uranium distribution patterns (Extended Data Table 3), including heterogeneous age distributions, as well as uranium accumulation in altered zones and along the enamel–dentine junction. Such values across dental tissues are characteristic of the complex diffusion history of ancient fossil teeth with several diffusion episodes, localized uranium hotspots and leaching zones, especially close to the pulp cavity and along cracks, as well as other alterations in the dental tissues40.

US–ESR dating

The ESR dating was carried out on the Celebochoerus fossil teeth (left P4 and left M3). The outer layer of enamel was extracted mechanically from dentine with a rotary saw and cleaned carefully of any dentine residue (outer ~100 µm ± 10% on each side). The P4 tooth enamel was then ground into powder and sieved to 90–180 μm before being split into 10 aliquots (about 95–100 mg each). While one aliquot was kept as a natural dose, the other nine aliquots received gamma irradiation steps of 50, 100, 250, 600, 1,200, 2,400, 4,000, 8,000 and 15,000 Gy at the Australian Nuclear Science and Technology Organisation. The aliquots were irradiated by a calibrated Gammacell 220 (60Co) gamma source with a dose rate of ~23.8 Gy min−1. The M3 enamel was kept as a fragment, and this fragment was mounted into a parafilm mould within a Teflon sample holder to record the angular dependency in the ESR response41,42,43,44. Irradiation of the fragment was performed with the Freiberg X-ray irradiation chamber for fragments, which contains a Varian VF50 X-ray gun at a voltage of 40 kV and 0.5 mA current on the fragment exposed to X-rays without shielding (apart from a 200 µm aluminium foil layer)45,46. Each fragment was irradiated after exponentially increasing irradiation times (at 90 s, 380 s, 900 s, 1,800 s, 3,600 s, 7,200 s, 14,400 s). For each irradiation step, the energy output of the X-ray gun was recorded at the beginning and end and then averaged, enabling us to correct for the dose rate received. For each irradiation step, the fragment was measured over 180° in x, y and z configurations with a 30° step41,43.

ESR intensities of tooth enamel powder were calculated using calibrated quartz tubes and measured using a Frieberg MS5000 ESR spectrometer at the GARG facility. Each tube was rotated three times with a 120° increment. All measurements (powder and fragment) were performed with the following conditions: 2 mW microwave power, 100 kHz modulation frequency with 1,024 points resolution, 0.1 mT modulation amplitude, 45 s conversion time, 12 mT sweep width and 21 s sweep time. The ESR intensities and dose–response curves followed previously reported recommendations29. The DE was determined using the McDoseE 2.0 program47. Both single saturated exponential (SSE) function and double saturated exponential (DSE) function were applied to obtain DE values, and both functions provided statistically undistinguishable results (P4: DSE, 2,275 ± 124 Gy; and SSE, 2,267 ± 99; M3: DSE, 2,140 ± 108 Gy; and SSE, 2,116 ± 118). Yet, it is our experience that SSE provides more systematic and reliable results than DSE, as long as recommendations from ref. 29 are followed.

ESR intensities were extracted from T1–B2 peak-to-peak amplitudes on the merged ESR signal or the powder spectra41. Isotropic and baseline corrections were applied uniformly across the measured spectra for fragment measurements42. The amount of unstable non-orientated CO2 radicals (NOCORs) was estimated on the fragment irradiated by X-ray to be negligible (~1%) and, therefore, could not be applied to the powder sample (M3) using the protocol described previously41. The results of the gamma rays irradiated powder are consequently uncorrected for NOCORs. The ESR dose–response curves for the fragment were obtained using merged ESR intensities of all orientations and associated s.d. values from the repeated measurements over one orientation only. For powder spectra, associated s.d. values were obtained using repeated measurements after shaking the tube at each irradiation step.

Sediment elemental concentrations, external beta and gamma dose rate contributions, and water content (measured) are shown in Extended Data Table 4. The external beta dose rates have been extrapolated from the U, Th and K contents measured on the associated sediment (~50 g). The sediments were collected in the immediate vicinity of the sample. The sediment was crushed, homogenized and separated into three aliquots before being digested in a 1:3 nitric/HCl acid solution (APHA 3125 ICPMS). The external gamma dose rates were determined using the associated sediment and assuming a 4π geometry. The cosmic dose rate was estimated based on consideration of the altitude, geomagnetic latitude and density (2 g cm−3) of sediment overburden48. However, a large part of the ancient sedimentary deposit (probably several metres in thickness) at the Calio locality has clearly eroded away over time, leaving only a 30 cm depth for the current burial sample.

The internal dose rate was calculated from the U-series measurements obtained on each enamel fragment and surrounding dentine. Both enamel and dentine were measured using rasters (see the U-series dating description above for parameters). Concentration and isotopic ratios were measured directly on the fragment used, and all measurements were averaged to obtain a single value for the entire tooth. Post-Rn equilibrium was assumed. Ages were calculated using dose rate conversion factors described previously49. Moreover, ESR ages were calculated using both the US-ESR MATLAB program50 and the DATA program51 to compare US–ESR results, and with DATA to obtained closed-system calculation (CSUS-ESR age estimation).

Stone artefact analysis

The stone artefacts excavated from Calio were analysed using qualitative and quantitative methods published elsewhere52,53,54. Artefact condition was assessed according to criteria outlined in Shea55, with taphonomic abrasion and edge-damaged considered separately. Artefact material is classified as chert in all cases pending closer assessment of local stone sources.

Technological length refers to the measurement from the point of force application (PFA) to the distal end of the flake along the percussion axis. Technological width is the maximum width at right angles to technological length. Thickness refers to maximum thickness at right angles to the plane defined by technological length and width. Maximum length and width are the maximum dimensions of the flake, along any axis. Thickness was also measured at 25%, 50% and 75% of the distance from the PFA to the distal end, as a proxy for morphological uniformity.

Platforms describe the nature of the surface marked by the PFA. Platform depth is the distance from the PFA to the dorsal platform edge, as measured along the plane defined by the percussion axis. Platform width measures the maximum width of the flake’s platform56. The number of flake scars on the platform surface was counted.

Exterior platform angles were measured using a lockable sliding bevel gauge combined with a digital goniometer. One arm of the sliding bevel was placed along the dorsal flake surface and the second arm was placed along the platform surface, from the dorsal platform edge to the PFA. The bevel was locked and the angle between the gauge’s arms was measured using the digital goniometer. The interior platform angle was measured directly using the digital goniometer. One arm was placed along the platform surface from the dorsal platform edge to the PFA, and the other arm was placed along the surface within 1–2 mm below the PFA, along the side of the hertzian cone at the start of the bulb of percussion, as described previously57.

The sizes of retouching scars measuring >2 mm in maximum dimension were recorded. Length was measured from the existing platform edge to the distal edge, along the percussion axis. Width was measured at right angles to length. Cortex proportion was assessed visually as described previously58. Cortex on platforms was included in the assessment of cortex coverage. The location of cortex was recorded as described previously59.

Flake types were recorded as described previously60, where type IV refers to flakes with non-cortical platforms and 100% dorsal cortex coverage; type V refers to flakes with non-cortical platforms and partial dorsal cortex coverage; and type VI refers to flakes with non-cortical platforms and no dorsal cortex (types I–III were not present in the Calio assemblage). Dorsal scar orientations followed the sector approach described previously61, excluding the redirecting flake.

Annotated 3D photogrammetric models were made of the Calio artefacts according to protocols described previously62. The photographs were taken using a Nikon D7200 camera with AF-S DX Nikkor 18–140 mm lens and processed with Agisoft Metashape v.2.0.1.16069. The 3D models can be accessed online (https://une.pedestal3d.com/r/ZdPcP-kXvc/).

The Calio artefact data are presented in Supplementary Table 1. Incomplete linear dimensions are recorded as negative values and highlighted in red font.

Reporting summary

Further information on research design is available in the Nature Portfolio Reporting Summary linked to this article.