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Showing 1–50 of 22299 results
Advanced filters: Author: C. A. PEARSON Clear advanced filters
  • Affinity-proteomics platforms often yield poorly correlated measurements. Here, the authors show that protein-altering variants drive a portion of inter-platform inconsistency and that accounting for genetic variants can improve concordance of protein measures and phenotypic associations across ancestries.

    • Jayna C. Nicholas
    • Daniel H. Katz
    • Laura M. Raffield
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-21
  • ATF6α activation in human and preclinical models of hepatocellular carcinoma is significantly associated with an aggressive tumour phenotype characterized by reduced survival, glycolytic reprogramming and local immunosuppression.

    • Xin Li
    • Cynthia Lebeaupin
    • Mathias Heikenwälder
    ResearchOpen Access
    Nature
    P: 1-12
  • Here, the authors conduct a metagenomic-based study of England’s rivers to show that biofilm bacteria are taxonomically and functionally diverse and are key to biogeochemical cycling, highlighting the importance of river biofilm bacteria in understanding and monitoring freshwater ecosystem health.

    • Amy C. Thorpe
    • Susheel Bhanu Busi
    • Daniel S. Read
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-14
  • Analysis of the somatic and transcriptomic profile of 123 acral melanoma samples from Mexican patients helps understand tumour origins and prognosis, and highlights the importance of including samples from diverse ancestries in cancer genomics studies.

    • Patricia Basurto-Lozada
    • Martha Estefania Vázquez-Cruz
    • Carla Daniela Robles-Espinoza
    ResearchOpen Access
    Nature
    P: 1-10
  • How the brain supports speaking and listening during conversation of its natural form remains poorly understood. Here, by combining intracranial EEG recordings with Natural Language Processing, the authors show broadly distributed frontotemporal neural signals that encode context-dependent linguistic information during both speaking and listening..

    • Jing Cai
    • Alex E. Hadjinicolaou
    • Sydney S. Cash
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • Here they demonstrate a therapeutic intervention elevating levels of CYP450-derived lipids to control the expansion of intermediate monocytes in tissue and peripheral blood, presenting a first in class therapeutic approach for treating chronic inflammatory disease.

    • Olivia V. Bracken
    • Parinaaz Jalali
    • Derek W. Gilroy
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • Huang, Rigau and colleagues observe major changes in how DNA is organized in early germ cells before they start developing into sperm or eggs. These results show that germline removes structural ‘memory’ of DNA folding to start fresh for the next generation.

    • Tien-Chi Huang
    • Maria Rigau
    • Petra Hajkova
    ResearchOpen Access
    Nature Structural & Molecular Biology
    P: 1-15
  • NatD is an acetyltransferase responsible for N-α-terminal acetylation of the histone H4 and H2A and has been linked to cell growth. Here the authors show that NatD-mediated acetylation of histone H4 serine 1 competes with the phosphorylation by CK2α at the same residue thus leading to the upregulation of Slug and tumor progression.

    • Junyi Ju
    • Aiping Chen
    • Quan Zhao
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-14
  • Plant traits drive ecosystem dynamics yet are challenging to map globally due to sparse measurements. Here, the authors combine crowdsourced biodiversity observations with Earth observation data to accurately map 31 plant traits at 1 km2 resolution.

    • Daniel Lusk
    • Sophie Wolf
    • Teja Kattenborn
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • A follow-up analysis of a clinical trial that evaluated anti-PD-1 therapy in patients with cancer who are living with HIV provides mechanistic insights into transcriptomic, cellular and cytokine changes related to immune checkpoint inhibitor treatment and identifies a signature associated with clinical response.

    • Aarthi Talla
    • Joao L. L. C. Azevedo
    • Rafick-Pierre Sekaly
    ResearchOpen Access
    Nature Medicine
    Volume: 32, P: 505-517
  • Post-transcriptional regulation of mRNA translation was explored using Ribo-STAMP and single-cell RNA sequencing to reveal cell-type-specific and isoform-specific translation patterns across hippocampal neuronal and non-neuronal cell types, highlighting functional differences between CA1 and CA3.

    • Samantha L. Sison
    • Federico Zampa
    • Giordano Lippi
    ResearchOpen Access
    Nature
    P: 1-13
  • Hepatic glycogenolysis is essential for protein glycosylation and rhythmic secretion by the liver. Disruptions to hepatic glycogenolysis, caused by congenital diseases or physiological factors such as obesity, caloric restriction and changes to meal timing, alter hepatic protein secretion.

    • Meltem Weger
    • Daniel Mauvoisin
    • Frédéric Gachon
    ResearchOpen Access
    Nature Metabolism
    P: 1-23
  • Spatial transcriptomics (ST) technologies link tissue morphology with gene expression, but remain expensive to use; furthermore, models that predict ST data from histopathology images possess considerable limitations. Here, the authors develop STimage, a deep learning probabilistic framework for ST prediction from histopathology images while prioritising robustness and interpretability.

    • Xiao Tan
    • Onkar Mulay
    • Quan Nguyen
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • Mucosal administration of a multivalent, adjuvanted vaccine against Clostridioides difficile promoted bacterial clearance and protected against morbidity, mortality, tissue damage and recurrence in mice.

    • Audrey K. Thomas
    • F. Christopher Peritore-Galve
    • D. Borden Lacy
    ResearchOpen Access
    Nature
    P: 1-9
  • In this study, the authors present an fMRI‑based signature of corticospinal connections, which predicts individual pain sensitivity, generalizes to patient cohorts, and tracks changes after brain stimulation, suggesting a biomarker to guide personalized pain care.

    • Xiao-Min Lin
    • Ling-Fei Guo
    • Ya-Zhuo Kong
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-18
  • While neoadjuvant chemotherapy can improve outcomes in patients with esophageal squamous carcinoma, resistance often develops. Here, the authors identify elevated INCENP and CDCA8 via YTHDF3 mediated translation as markers of poor response to neoadjuvant chemotherapy in esophageal squamous carcinoma.

    • Xiangyu Wang
    • Ting Wang
    • Zigang Dong
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-18
  • A measurement strategy is described that is able to read out the parity of minimal two-site Kitaev chains in real time, by coupling two Majoranas and resolving their quantum capacitance.

    • Nick van Loo
    • Francesco Zatelli
    • Leo P. Kouwenhoven
    Research
    Nature
    Volume: 650, P: 334-339
  • A comprehensive atlas platform integrating transcriptional and epigenetic data enables more precise engineering of T cell states, accelerating the rational design of more effective cellular immunotherapies.

    • H. Kay Chung
    • Cong Liu
    • Wei Wang
    ResearchOpen Access
    Nature
    P: 1-11
    • T. LL. HUMBERSTONE
    Research
    Nature
    Volume: 137, P: 951
  • Population-level analyses and in vitro experiments show that a specific genetic variant of cyclin D3 inhibits the growth of the malaria-causing parasite Plasmodium falciparum in erythrocytes, and suggest that its high frequency in Sardinia was driven by past endemic malaria.

    • Maria Giuseppina Marini
    • Maura Mingoia
    • Francesco Cucca
    ResearchOpen Access
    Nature
    P: 1-9
  • Single-cell RNA sequencing and assay for transposase-accessible chromatin using sequencing profiling of human retinal samples from diverse ancestries create an epitranscriptomic atlas characterizing over 130 cell types. Integration with genome-wide association study and expression quantitative trait loci data provides further insights into gene regulation and disease etiology.

    • Jin Li
    • Jun Wang
    • Rui Chen
    Research
    Nature Genetics
    Volume: 58, P: 418-433
  • This research identifies two neural factors linked to externalizing and internalizing symptoms through a longitudinal imaging-genetic cohort. Distinct neural configurations and cognitive-behavioral relevance highlight the need for tailored therapeutic strategies addressing psychiatric comorbidity across developmental stages.

    • Chao Xie
    • Shitong Xiang
    • Gunter Schumann
    ResearchOpen Access
    Nature Mental Health
    P: 1-15
  • Donahue et al. show that ageing is associated with changes in ER morphology. ER-phagy drives age-associated ER remodelling through tissue-specific factors.

    • Eric K. F. Donahue
    • Nathaniel L. Hepowit
    • Kristopher Burkewitz
    ResearchOpen Access
    Nature Cell Biology
    P: 1-16
  • Liu et al. report Chinese normative lifespan brain charts showing later neurodevelopmental milestones than those detected in Western cohorts. Individual deviations from these norms are valuable in assessing clinical risk and outcomes.

    • Zhizheng Zhuo
    • Li Chai
    • Yaou Liu
    Research
    Nature Neuroscience
    Volume: 29, P: 420-434
  • Neville, Ferguson et al. show that non-canonical Polycomb repressive complex 1.1-mediated gene silencing is antagonized by DOT1L and is required for the therapeutic efficacy of Menin and DOT1L inhibitors in mixed-lineage leukaemia.

    • Daniel Neville
    • Daniel T. Ferguson
    • Omer Gilan
    ResearchOpen Access
    Nature Cell Biology
    Volume: 28, P: 307-322
  • The impact of variants of uncertain significance (VUS) on protein function and cancer risk remain unclear. Here, the authors focus on the functional impact of VUS of the PALB2 gene and identify defects in DNA damage repair by homologous recombination associated with increased risk of breast cancer.

    • Rick A.C.M. Boonen
    • Sabine C. Knaup
    • Haico van Attikum
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • This study provides a comprehensive profile of human fetal midbrain development and its comparison with lab-grown midbrain cultures. These findings demonstrate that midbrain organoids recapitulate fetal developmental stages while capturing essential spatial and molecular characteristics, relevant to dopamine-related disorders.

    • Dimitri Budinger
    • Pau Puigdevall
    • Serena Barral
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-25
  • The potential of mammogram-based biological age predictors remains to be fully explored. Here this group introduces a deep learning model to estimate the biological age of the breast using healthy mammograms.

    • Xin Wang
    • Tao Tan
    • Ritse Mann
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-21
  • How white matter develops along the length of major tracts in humans remains unknown. Here, the authors identify fundamental patterns of human white matter development along distinct axes that reflect brain organization.

    • Audrey C. Luo
    • Steven L. Meisler
    • Theodore D. Satterthwaite
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-19
  • Navigational affordances describe our ability to identify routes of egress within scenes. Here, the authors show that this process likely occurs in early dorsal visual cortex and that such navigational affordances can emerge following brief presentation times.

    • Elisa Zamboni
    • Rebecca Lowndes
    • Edward H. Silson
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-14
  • Analysis of a placebo-controlled trial of a BCMA-targeting CAR-T cell therapy in patients with myasthenia gravis shows that CAR-T cell infusion selectively remodels the systemic immune environment, with elimination of BCMA-high plasma cells and activated plasmacytoid dendritic cells and changes in the autoreactive B cell repertoire.

    • Renee R. Fedak
    • Rachel N. Ruggerie
    • Kelly Gwathmey
    ResearchOpen Access
    Nature Medicine
    P: 1-13
  • Evolutionarily related ‘proto-point’ centromeres providing resolution to the evolutionary origins of point centromeres are identified in yeast, and comparison shows they evolved in an ancestor with retrotransposon-rich centromeres and that long-terminal-repeat retrotransposons are the genetic substrate.

    • Max A. B. Haase
    • Luciana Lazar-Stefanita
    • Jef D. Boeke
    ResearchOpen Access
    Nature
    P: 1-8
  • Genetic models for psychiatric disorders often overlook ancestry diversity. Here, the authors use PsychENCODE and GWAS data to build ancestry-specific GReX models, improving TWAS and revealing novel genes and pathways linked to brain development and psychiatric risk.

    • Aarti Jajoo
    • Vijetha Balakundi
    • Nikolaos P. Daskalakis
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-21
  • Single-cell technologies generate complex datasets, but effective cell alignment across studies—within and across modalities—remains challenging. Here, the authors introduce scGALA, a graph-based self-supervised framework that advances cell alignment to improve data integration and harmonization.

    • Guo Jiang
    • Kailu Song
    • Jun Ding
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-24