Nature Search

Viral genetic clustering and transmission dynamics of the 2022 mpox outbreak in Portugal

An analysis of viral genomes and epidemiological data from the 2022 mpox outbreak in Portugal sheds light on the heterogeneity of early transmission events, with national and international linkages.

Vítor Borges
Mariana Perez Duque
João Paulo Gomes
ResearchOpen Access11 Sept 2023
Nature Medicine

Volume: 29, P: 2509-2517
Bringing Text Miners and Biologists Closer Together

Anália Lourenço
Sónia Carneiro
Eugénio Ferreira
ResearchOpen Access28 Apr 2009
Nature Precedings

P: 1
Pilot-scale high-consistency mechanical refining improves enzymatic saccharification of lignocellulosic feedstock

Liliane Pires Andrade
Maria Isabel Rodrigues
George Jackson de Moraes Rocha
ResearchOpen Access27 Mar 2025
Scientific Reports

Volume: 15, P: 1-10
Stress-inducible phosphoprotein 1 (STIP1) is a critical stemness regulator in mouse embryonic stem cells and early mammalian development

Combined in silico and in vitro approaches reveal that the co-chaperone STIP1 supports pluripotent stem cell identity, proliferation, and stress resilience, highlighting proteostasis as a key mechanism during early development.

Camila Felix de Lima Fernandes
Marilene Hohmuth Lopes
Marco A. M. Prado
ResearchOpen Access29 Aug 2025
Communications Biology

Volume: 8, P: 1-16
Changes in preterm birth and stillbirth during COVID-19 lockdowns in 26 countries

An analysis of 52 million births in 26 countries shows small reductions in preterm birth during the first to third months of lockdown. Further research is needed to examine causal pathways.

Clara Calvert
Meredith (Merilee) Brockway
Meghan B. Azad
ResearchOpen Access27 Feb 2023
Nature Human Behaviour

Volume: 7, P: 529-544
Rapid, scalable assessment of SARS-CoV-2 cellular immunity by whole-blood PCR

The T cell response to SARS-CoV-2 is detected by a PCR assay on whole blood.

Megan Schwarz
Denis Torre
Ernesto Guccione
Research13 Jun 2022
Nature Biotechnology

Volume: 40, P: 1680-1689
A second update on mapping the human genetic architecture of COVID-19

Masahiro Kanai
Shea J. Andrews
Matthew Solomonson
ResearchOpen Access06 Sept 2023
Nature

Volume: 621, P: E7-E26
The impact of users’ cognitive function on evaluator perceptions of usability

Ana Isabel Martins
Anabela G. Silva
Nelson P. Rocha
ResearchOpen Access12 Aug 2022
Scientific Reports

Volume: 12, P: 1-6
First report of an Onchocercidae worm infecting Psychodopygus carrerai carrerai sandfly, a putative vector of Leishmania braziliensis in the Amazon

Andreia Fernandes Brilhante
Alessandra Lima de Albuquerque
Eunice Aparecida Bianchi Galati
ResearchOpen Access17 Sept 2020
Scientific Reports

Volume: 10, P: 1-9
A repeat-primed PCR assay for pentanucleotide repeat alleles in spinocerebellar ataxia type 37

Joana Rocha Loureiro
Cláudia Louro Oliveira
Isabel Silveira
Research11 Jun 2018
Journal of Human Genetics

Volume: 63, P: 981-987
Efficacy of ChAdOx1 nCoV-19 (AZD1222) vaccine against SARS-CoV-2 lineages circulating in Brazil

Emerging variants of SARS-CoV-2 raise concerns about vaccine efficiency. Here, the authors present a post-hoc analysis for the ChAdOx1 nCoV-19 (AZD1222) vaccine trial in Brazil and provide efficacy against symptomatic COVID-19 caused by the Zeta (P.2) and other variants.

Sue Ann Costa Clemens
Pedro M. Folegatti
Rafael Zimmer
ResearchOpen Access06 Oct 2021
Nature Communications

Volume: 12, P: 1-10
SARS-CoV-2 introductions and early dynamics of the epidemic in Portugal

Borges et al. study the dynamics of SARS-CoV-2 in Portugal during 2020. The authors use phylodynamic modelling to infer patterns of SARS-CoV-2 introduction into Portugal and its subsequent spread, providing a comprehensive genomic epidemiology study of the early SARS-CoV-2 epidemic in Portugal.

Vítor Borges
Joana Isidro
João Paulo Gomes
ResearchOpen Access28 Jan 2022
Communications Medicine

Volume: 2, P: 1-11
Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing

Christian Lieven
Moritz E. Beber
Cheng Zhang
Amendments and CorrectionsOpen Access19 Mar 2020
Nature Biotechnology

Volume: 38, P: 504
Insights into the threats of toxoplasmosis for free-ranging black-tufted marmosets living in our neighborhood

Davi Emanuel Ribeiro de Sousa
Isabel Luana de Macêdo
Marcio Botelho de Castro
ResearchOpen Access08 May 2025
Scientific Reports

Volume: 15, P: 1-14
Measuring DNA modifications with the comet assay: a compendium of protocols

The comet assay is commonly used to assess DNA damage. This collection of consensus protocols includes adaptations for a wide range of species and sample types, assay formats and detection of different types of DNA lesions.

Andrew Collins
Peter Møller
Amaya Azqueta
Protocols27 Jan 2023
Nature Protocols

Volume: 18, P: 929-989
Involvement of the capsular GalXM-induced IL-17 cytokine in the control of Cryptococcus neoformans infection

Isabel Ferreira LaRocque-de-Freitas
Juliana Dutra B. Rocha
Celio Geraldo Freire-de-Lima
ResearchOpen Access06 Nov 2018
Scientific Reports

Volume: 8, P: 1-16
The two faces of titanium dioxide nanoparticles bio-camouflage in 3D bone spheroids

W. Souza
S. G. Piperni
A. R. Ribeiro
ResearchOpen Access27 Jun 2019
Scientific Reports

Volume: 9, P: 1-14
Ecological modelling approaches for predicting emergent properties in microbial communities

As extremely large microbial community datasets have proliferated, numerous approaches to studying their ecological properties have emerged. In this Review, the authors offer a guide to five ecological modelling techniques used to study complex microbial communities.

Naomi Iris van den Berg
Daniel Machado
Kiran R. Patil
Reviews16 May 2022
Nature Ecology & Evolution

Volume: 6, P: 855-865
From ideation to real context of use of a digital solution to promote physical and cognitive training for older adults

Ana Isabel Martins
Ceci Diehl
Anabela G. Silva
ResearchOpen Access13 Jan 2025
Scientific Reports

Volume: 15, P: 1-14
Contribution of haptoglobin phenotypic variation to the presence of hyperhomocysteinemia in type 2 diabetics with and without angiopathy

Isabel Ferreira
Manuel Bicho
Ana Valente
Research26 Oct 2024
European Journal of Clinical Nutrition

Volume: 79, P: 266-272
Clinical validation of cutoff target ranges in newborn screening of metabolic disorders by tandem mass spectrometry: A worldwide collaborative project

David M S McHugh
Cynthia A Cameron
Wendy M Zakowicz
Research15 Feb 2011
Genetics in Medicine

Volume: 13, P: 230-254
OsTH1 is a key player in thiamin biosynthesis in rice

Maria Faustino
Tiago Lourenço
M. Margarida Oliveira
ResearchOpen Access12 Jun 2024
Scientific Reports

Volume: 14, P: 1-12
MEMOTE for standardized genome-scale metabolic model testing

Christian Lieven
Moritz E. Beber
Cheng Zhang
Correspondence02 Mar 2020
Nature Biotechnology

Volume: 38, P: 272-276
Co-occurrence of nonsense mutations in MSH6 and MSH2 in Lynch syndrome families evidencing that not all truncating mutations are equal

Carla Pinto
Manuela Pinheiro
Manuel R Teixeira
Research08 Oct 2015
Journal of Human Genetics

Volume: 61, P: 151-156
Global Roadkill Data: a dataset on terrestrial vertebrate mortality caused by collision with vehicles

Clara Grilo
Tomé Neves
Eric Guinard
ResearchOpen Access31 Mar 2025
Scientific Data

Volume: 12, P: 1-14
Vertical stratification of insect abundance and species richness in an Amazonian tropical forest

Dalton de Souza Amorim
Brian V. Brown
José Albertino Rafael
ResearchOpen Access02 Feb 2022
Scientific Reports

Volume: 12, P: 1-10
Common and distinctive genomic features of Klebsiella pneumoniae thriving in the natural environment or in clinical settings

Jaqueline Rocha
Isabel Henriques
Célia M. Manaia
ResearchOpen Access21 Jun 2022
Scientific Reports

Volume: 12, P: 1-10
Correction: Corrigendum: Super-resolution mapping of glutamate receptors in C. elegans by confocal correlated PALM

Jeroen Vangindertael
Isabel Beets
Hideaki Mizuno
Amendments and CorrectionsOpen Access20 May 2016
Scientific Reports

Volume: 6, P: 1
Vulnerability of Tritia reticulata (L.) early life stages to ocean acidification and warming

Isabel B. Oliveira
Daniela B. Freitas
Susana Galante-Oliveira
ResearchOpen Access24 Mar 2020
Scientific Reports

Volume: 10, P: 1-13
Preeclampsia predicts higher incidence of bronchopulmonary dysplasia

Gustavo Rocha
Filipa Flor de Lima
Conceição Quintas
Research29 May 2018
Journal of Perinatology

Volume: 38, P: 1165-1173
The metabolic syndrome- associated small G protein ARL15 plays a role in adipocyte differentiation and adiponectin secretion

Nuno Rocha
Felicity Payne
Robert K. Semple
ResearchOpen Access14 Dec 2017
Scientific Reports

Volume: 7, P: 1-12
Super-resolution mapping of glutamate receptors in C. elegans by confocal correlated PALM

Jeroen Vangindertael
Isabel Beets
Hideaki Mizuno
ResearchOpen Access01 Sept 2015
Scientific Reports

Volume: 5, P: 1-14
Yeast metabolic chassis designs for diverse biotechnological products

Paula Jouhten
Tomasz Boruta
Kiran Raosaheb Patil
ResearchOpen Access19 Jul 2016
Scientific Reports

Volume: 6, P: 1-9
Cardiovascular responses as predictors of mortality in children with acute brain injury

Marta João Silva
Hernâni Gonçalves
Inês Azevedo
Research15 Nov 2024
Pediatric Research

Volume: 97, P: 2347-2353
Geriatric assessment may help decision-making in elderly patients with inoperable, locally advanced non-small-cell lung cancer

Maite Antonio
Juana Saldaña
Ernest Nadal
ResearchOpen Access30 Jan 2018
British Journal of Cancer

Volume: 118, P: 639-647
Astrocyte-derived TNF and glutamate critically modulate microglia activation by methamphetamine

Teresa Canedo
Camila Cabral Portugal
Teresa Summavielle
Research16 Aug 2021
Neuropsychopharmacology

Volume: 46, P: 2358-2370
Low doses of ionizing radiation enhance angiogenesis and consequently accelerate post-embryonic development but not regeneration in zebrafish

Filipa G. Marques
Lara Carvalho
Susana Constantino Rosa Santos
ResearchOpen Access21 Feb 2020
Scientific Reports

Volume: 10, P: 1-8
Bile acids profile and redox status in healthy infants

Ermelinda Santos Silva
Susana Rocha
Dora Brites
Research22 Oct 2022
Pediatric Research

Volume: 93, P: 1856-1864
Diagnostic accuracy and the first genotype–phenotype correlation in glycogen storage disease type V

Jorge Diogo Da Silva
Ângela Pereira
Nataliya Tkachenko
Research05 Dec 2023
Pediatric Research

Volume: 96, P: 365-371
Correction: Preeclampsia predicts higher incidence of bronchopulmonary dysplasia

Gustavo Rocha
Filipa Flor de Lima
Conceição Quintas
Amendments and Corrections03 Aug 2018
Journal of Perinatology

Volume: 38, P: 1284
Brazilian Maternal and Child Nutrition Consortium: establishment, data harmonization and basic characteristics

Thaís Rangel Bousquet Carrilho
Dayana Rodrigues Farias
Sotero Serrate Mengue
ResearchOpen Access10 Sept 2020
Scientific Reports

Volume: 10, P: 1-12
New variants, challenges and pitfalls in DMD genotyping: implications in diagnosis, prognosis and therapy

Rosário Santos
Ana Gonçalves
Elsa Bronze-da-Rocha
Research10 Jul 2014
Journal of Human Genetics

Volume: 59, P: 454-464

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