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Showing 1–50 of 94 results
Advanced filters: Author: Isabelle Salmon Clear advanced filters
  • By combining left- and right-handed DNA-PAINT probes, Unterauer et al. achieve simple, robust, and highly multiplexed super-resolution. They show 13-plex neuronal maps, revealing nanoscale organization of cytoskeleton, organelles, and synapses.

    • Eduard M. Unterauer
    • Eva-Maria Schentarra
    • Ralf Jungmann
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-8
  • The nanoscale organization of the antigen-antibody complexes influences the therapeutic action of monoclonal antibodies. Here, the authors present a multi-target 3D RESI imaging assay for the nanometer spatial analysis of CD20 in complex with therapeutic monoclonal antibodies within intact cells, to analyse the interdependency between the mode of antibody binding and the therapeutic function.

    • Isabelle Pachmayr
    • Luciano A. Masullo
    • Ralf Jungmann
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • Extracting quantitative information on biomolecular oligomerisation with high resolution remains a significant challenge. Here, the authors propose SPINNA, a framework that compares nearest-neighbour distances from experimental single-protein position data with those obtained from simulations based on a model of protein oligomerisation.

    • Luciano A. Masullo
    • Rafal Kowalewski
    • Ralf Jungmann
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • Material flows between ecosystems, though the degree to which ecosystems are coupled is under investigation. Here Gounand et al. analyze cross-ecosystem carbon flows and relate them to in situ functions, and report different dependencies on spatial flows across numerous ecosystems.

    • Isabelle Gounand
    • Chelsea J. Little
    • Florian Altermatt
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-8
  • Changes in the tumour microenvironment have been associated with response and resistance to immunotherapy. Here, by performing longitudinal transcriptomic and spatial analysis, the authors report the exploratory analysis of their phase II trial of neoadjuvant chemotherapy alone or in combination with pembrolizumab (anti-PD1) in patients with advanced high-grade ovarian carcinoma.

    • Olivia Le Saux
    • Maude Ardin
    • Isabelle Ray-Coquard
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-15
  • Using intensive eDNA sampling in space and time across five rivers in Europe and North America, this study shows that eDNA gives relevant information on freshwater diversity and ecology across broad taxonomic groups, and with limited downstream transport. The findings demonstrate that eDNA is vital for freshwater biodiversity monitoring in a time of anthropogenic change.

    • William Bernard Perry
    • Mathew Seymour
    • Simon Creer
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-13
  • Pseudokinases lack kinase activity, yet they impact cellular physiology through the regulation of bona fide signaling kinases. Here the authors describe the structure of the SgK223 pseudokinase and its adjacent domains, and identify regulatory interfaces required for self-assembly and downstream signaling.

    • Onisha Patel
    • Michael D. W. Griffin
    • Isabelle S. Lucet
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-15
  • Kovalski et al. perform a genome-wide CRISPRi screen for selective MYC mRNA translation regulators and identify RBM42 as a ribosome-associated protein that modulates translation of MYC and an oncogenic mRNA programme required for pancreatic cancer growth.

    • Joanna R. Kovalski
    • Goksu Sarioglu
    • Davide Ruggero
    Research
    Nature Cell Biology
    Volume: 27, P: 518-529
  • Resistance to anti-EGFR therapy is a clinical issue for patients with advanced head and neck cancers. Here, the authors show that therapy-resistant cancer cells enhance fatty acid metabolism, which can be therapeutically targeted by inhibiting peroxisome proliferator-activated receptor alpha (PPARα).

    • Valentin Van den bossche
    • Julie Vignau
    • Cyril Corbet
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-21
  • Filamin proteins are degraded by ASB2α E3 ubiquitin ligase and may affect T cell function. Here the authors show that increased levels of Filamin A and Filamin B in Th2 cells reduces allergic inflammation in mouse models through reduced Th2 cell recruitment into inflamed lungs.

    • Kilian Maire
    • Léa Chamy
    • Isabelle Lamsoul
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-17
  • Shwachman-Diamond syndrome (SDS) is a leukemia predisposition disorder that is caused by defective release of eIF6 during ribosome assembly. Here the authors show that acquired somatic EIF6 mutations are frequent in the hematopoietic cells from individuals with SDS and provide a selective advantage over non-modified cells.

    • Shengjiang Tan
    • Laëtitia Kermasson
    • Patrick Revy
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-17
  • Hypothalamus participates in systemic metabolic processes, while high calorie intake increases immune activation in the central nervous system. Here the authors show that reduced regulatory T cells in the hypothalamus contribute to elevated immune activation in a high calorie environment, thereby prompting a potential therapy target for metabolic diseases.

    • Maike Becker
    • Stefanie Kälin
    • Carolin Daniel
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-23
  • The authors introduce a single-molecule DNA-barcoding method, resolution enhancement by sequential imaging, that improves the resolution of fluorescence microscopy down to the Ångström scale using off-the-shelf fluorescence microscopy hardware and reagents.

    • Susanne C. M. Reinhardt
    • Luciano A. Masullo
    • Ralf Jungmann
    ResearchOpen Access
    Nature
    Volume: 617, P: 711-716
  • We describe netrin-1 upregulation in a majority of human endometrial carcinomas and demonstrate that netrin-1 blockade, using the anti-netrin-1 antibody NP137, is effective both in a mouse model and in patients with endometrial carcinomas.

    • Philippe A. Cassier
    • Raul Navaridas
    • Patrick Mehlen
    ResearchOpen Access
    Nature
    Volume: 620, P: 409-416
  • Neugebauer et al. show activation of the usually silenced embryonic factor DUX4 by herpesviruses in vitro and in patients, and demonstrate that depletion of DUX4 by nanobody degraders abrogates viral replication.

    • Eva Neugebauer
    • Stephanie Walter
    • Florian Full
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • Conventional selections of AAV capsid libraries are inefficient at searching sequence space. Here the authors report ‘Fit4Function’, a generalizable ML approach for systematically engineering multi-trait AAV capsids, and use this to predict cross-species traits of peptide-modified AAV capsids.

    • Fatma-Elzahraa Eid
    • Albert T. Chen
    • Benjamin E. Deverman
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-14
  • Idiopathic inflammatory myopathies are severe autoimmune diseases with poorly understood pathogenesis. In this study, the authors use Icos-deficient NOD mice as a model for myositis, as well as clinical samples, to demonstrate mitochondrial abnormalities and metabolic dysfunction, which can be reversed by treatment with the ROS scavenger, N-acetylcysteine (NAC).

    • Catalina Abad
    • Iago Pinal-Fernandez
    • Olivier Boyer
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-18
  • The antigen-B-cell-receptor interaction is the driving force of terminal B cell development that spans from B cell activation to antibody secreting plasma cells. Here authors determine, using DNA-PAINT super-resolution microscopy, how antigen affinity and valency define antigen binding to BCR in an in vitro system allowing precision control of these parameters.

    • Alexey Ferapontov
    • Marjan Omer
    • Søren Egedal Degn
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-20
  • Changes in gene expression in the hippocampus and the cortex are pivotal for memory consolidation. Gräff and colleagues use a recognition task in mice to show that epigenetic post-translational modifications are rapidly activated in the hippocampus after learning, but induced with a delay in the cortex.

    • Johannes Gräff
    • Bisrat T. Woldemichael
    • Isabelle M. Mansuy
    Research
    Nature Communications
    Volume: 3, P: 1-8
  • A global network of researchers was formed to investigate the role of human genetics in SARS-CoV-2 infection and COVID-19 severity; this paper reports 13 genome-wide significant loci and potentially actionable mechanisms in response to infection.

    • Mari E. K. Niemi
    • Juha Karjalainen
    • Chloe Donohue
    ResearchOpen Access
    Nature
    Volume: 600, P: 472-477
  • Bacteria produce small iron-binding molecules called siderophores, which are recognised by outer-membrane transporters. Here, the authors show that a Pseudomonas transporter recognises the siderophore enterobactin using extracellular loops distant from the pore, and propose that there is a second binding site deeper inside the structure.

    • Lucile Moynié
    • Stefan Milenkovic
    • James H. Naismith
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-14
  • Observations from the Lucy spacecraft of the small main-belt asteroid (152830) Dinkinesh reveals unexpected complexity, with a longitudinal trough and equatorial ridge, as well as the discovery of the first contact binary satellite.

    • Harold F. Levison
    • Simone Marchi
    • Yifan Zhao
    ResearchOpen Access
    Nature
    Volume: 629, P: 1015-1020
  • Rhodococcus equiis an animal pathogen that sometimes causes opportunistic infections in immunocompromised patients. Speck et al. present the case of a 62-year-old male renal transplant recipient who presented with fever, hemoptysis and left-sided pleuritic chest pain. After numerous investigations, a diagnosis of R. equi infection with bacteremic pleuropneumonia and pseudotumor was made. This Case Study describes the diagnosis and management of R. equiinfection, which has a very varied clinical presentation in humans.

    • Dorothee Speck
    • Irene Koneth
    • Isabelle Binet
    Reviews
    Nature Clinical Practice Nephrology
    Volume: 4, P: 398-403
  • The proteome-wide characterization of proteostasis depends on robust approaches to determine protein half-lives. Here, the authors improve the accuracy and precision of mass spectrometry-based quantification, enabling reliable protein half-life determination in several non-dividing cell types.

    • Toby Mathieson
    • Holger Franken
    • Mikhail M. Savitski
    ResearchOpen Access
    Nature Communications
    Volume: 9, P: 1-10
  • Circadian disruption is implicated in the development of different human cancers. Here the authors show that chronic circadian disruption, through continuous jet lag, only moderately affects primary tumour growth but promotes cancer-cell dissemination and metastasis in a mouse model of spontaneous mammary tumorigenesis.

    • Eva Hadadi
    • William Taylor
    • Hervé Acloque
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • Experiments in mice show that expression of the oncogene SmoM2 induces basal cell carcinoma in the ear epidermis but not in the back skin, and that this difference in susceptibility is regulated by the extracellular matrix.

    • Nordin Bansaccal
    • Pauline Vieugue
    • Cédric Blanpain
    Research
    Nature
    Volume: 623, P: 828-835
  • In mouse and human squamous cell carcinoma, loss of function of FAT1 promotes tumour initiation, malignant progression and metastasis through the activation of a hybrid epithelial-to-mesenchymal transition phenotype.

    • Ievgenia Pastushenko
    • Federico Mauri
    • Cédric Blanpain
    Research
    Nature
    Volume: 589, P: 448-455
  • Netrin-1 is upregulated in cancer models that undergo spontaneous epithelial-to-mesenchymal transition, and its targeting blocks the progression of tumour cells to a late mesenchymal state, suggesting possible therapeutic applications.

    • Justine Lengrand
    • Ievgenia Pastushenko
    • Cédric Blanpain
    Research
    Nature
    Volume: 620, P: 402-408
  • DNA replication requires the loading of the replicative helicase onto the DNA molecule; in bacteria this was believed to be solely accomplished by DnaC and DnaI. Here the authors identify DciA as an ancestral and still widely distributed replicative helicase loader.

    • Pierre Brézellec
    • Isabelle Vallet-Gely
    • Jean-Luc Ferat
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-7
  • Wang et al. use transcriptomic analysis to show that disruption of the transcription factor Lyl-1 in primitive macrophage progenitors results in defective differentiation that impacts on embryonic patterning and neurodevelopment. They also show that Lyl-1 disruption leads to a reduction in mature microglia, thus revealing its role in macrophage and microglial development

    • Shoutang Wang
    • Deshan Ren
    • Isabelle Godin
    ResearchOpen Access
    Communications Biology
    Volume: 4, P: 1-16
  • Epithelial-to-mesenchymal transition in tumour cells occurs through distinct intermediate states, associated with different metastatic potential, cellular properties, gene expression, and chromatin landscape

    • Ievgenia Pastushenko
    • Audrey Brisebarre
    • Cédric Blanpain
    Research
    Nature
    Volume: 556, P: 463-468
  • Spatially selective and temporally controlled stimulation of the spinal cord, together with rehabilitation, results in substantial restoration of locomotor function in humans with spinal cord injury.

    • Fabien B. Wagner
    • Jean-Baptiste Mignardot
    • Grégoire Courtine
    Research
    Nature
    Volume: 563, P: 65-71