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The SUMO E3 ligase ZNF451 is a representative member of a new class of SUMO enzymes that execute catalysis via tandem SUMO-interaction motifs, thus allowing efficient SUMO-chain formation.

CONCORD generates denoised cell encodings that preserve key biological structures in single-cell datasets.

HistoPlexer, a deep learning model, generates multiplexed protein expression maps from H&E images, capturing tumour–immune cell interactions. It outperforms baselines, enhances immune subtyping and survival prediction and offers a cost-effective tool for precision oncology.

Fine-scale geospatial mapping of overweight and wasting (two components of the double burden of malnutrition) in 105 LMICs shows that overweight has increased from 5.2% in 2000 to 6.0% in children under 5 in 2017. Although overall wasting decreased over the same period, most countries are not on track to meet the World Health Organization’s Global Nutrition Target of <5% in over half of LMICs by 2025.

Most genetic risk variants for brain disorders lie in non-coding regions and are difficult to interpret. Here, the authors develop BASIC, a method integrating bulk and single-cell eQTLs, to reveal cell-type-specific effects and improve gene discovery and disease colocalization.

Here, the authors demonstrate the electrical tunability of the nonlinear interactions, ultrafast formation and decay dynamics of layer-hybridized excitons in a field-effect device based on natural homobilayer MoS₂.

MultiSTAAR provides a general and flexible statistical framework for functionally informed multi-trait rare variant analysis of biobank-scale sequencing studies by jointly analyzing multiple traits and incorporating annotation information.

The proportion of a population that has previously been infected by a pathogen is typically estimated using antibody thresholds adjusted for sensitivity and specificity. Here, the authors present a model-based alternative to threshold methods which accounts for antibody waning and other sources of spectrum bias.

A classical device generates states with no relative superposition. Here, authors introduce models to simulate sets of quantum states by stochastically combining classical devices. They present an avenue to understand to what extent quantum states defy generic models based on classical devices.

Podosomes are actin structures important in multiple cell functions. Here, the authors use iPALM microscopy to reveal an “hourglass” shape of the podosome actin core, a protruding “knob” at the bottom of the core, and two actin networks extending from it.

Sonomate is a digital assistant for ultrasound examinations, supporting users through feedback, anatomical recognition and interactive question answering.

In this study, the authors develop a mathematical modelling framework to estimate the impacts of non-pharmaceutical interventions and vaccination on COVID-19 incidence. The model accounts for changes in SARS-CoV-2 variant and population immunity, and here they use it to investigate epidemic dynamics in French Polynesia.

Single-cell technologies generate complex datasets, but effective cell alignment across studies—within and across modalities—remains challenging. Here, the authors introduce scGALA, a graph-based self-supervised framework that advances cell alignment to improve data integration and harmonization.

Delayed treatment for malaria increases the risk of severe disease. Here, the authors estimate the rates of treatment delay for children under five in malaria-endemic regions of Africa.

The authors identify flip probability as a universal quantity in random explorations. Here, the authors show it follows a simple inverse law across Markovian, non-Markovian, and real-world systems.

Hutchinson-Gilford Progeria Syndrome is characterized by premature aging with cardiovascular disease being the main cause of death. Here the authors show that inhibition of the NAT10 enzyme enhances cardiac function and fitness, and reduces age-related phenotypes in a mouse model of premature aging.

Analysis of genomic networks from 430 modern individuals across 21 Pacific island populations reveals the human settlement history of Polynesia.

Hole spin qubits in germanium have seen significant advancements, though improving control and noise resilience remains a key challenge. Here, the authors realize a dressed singlet-triplet qubit in germanium, achieving frequency-modulated high-fidelity control and a tenfold increase in coherence time.

Chromosomes interact with the cell environment through their interface. Here, the authors use Atomic Force Microscopy to probe the interface and local micromechanics of the chromatin network of native human mitotic chromosomes.

An ensemble of spins from nitrogen–vacancy centres in diamonds is prepared in a spin-squeezed state.

Three-component Fermi gases represent a versatile platform for quantum simulation, including quantum chromodynamics-like physics, pairing and few-body effects. Here the authors demonstrate control of spin imbalances and an unexpected asymmetric decay due to different three-body losses for each component, and whose microscopic mechanism remains to be understood.

Repetitive DNA sequences shape genome evolution and instability. Here, the authors analyze repeat length distributions across over 300 mammals and show that long repeats arise and persist through a dynamic balance of mutation processes, without requiring natural selection.

Despite observed routinely from spacecrafts landing on, e.g., lunar soil, the origin of radial streak patterns has been unclear up to now. Here, the authors report an experimental study of such instabilities in the coupled dynamics of rocket plumes and sand surfaces.

Antiferromagnets exhibit high frequency magnons, in the THz regime, a point potentially useful for applications, however, it has meant that detecting spin-fluctuations in antiferromagnets is typically too fast for current experimental approaches. Here Weiss et al use femtosecond noise correlation spectroscopy to observe magnon fluctuations in Sm0.7Er0.3FeO3.

BCNE, an unsupervised deep-learning method, reveals clear trajectories of brain activity and effectively distinguishes cognitive events, learning stages and active versus passive movement, outperforming traditional data visualization methods.

SUMO forms flexible polymeric chains that can interact with ubiquitin ligases, such as RNF4. Here Xu et al. have used NMR spectroscopy and biochemical experiments to investigate the interaction between SUMO and RNF4, and propose a mechanism for delivery of substrates to the ubiquitination machinery.

The authors show that the SUMO protease SENP6 plays an essential role in maintaining genome integrity by disassembling SUMO2/3 polymers from DNA damage response proteins, thereby preventing their trapping at sites of DNA damage and in nuclear condensates.

Here, using pre-HIV-infection and non-HIV samples in a multi-modal study of microbiomes and metabolomes, the authors develop a taxon-specific measure of DISruption in COrrelations (DISCO) revealing system-wide dysbiosis preceding HIV-1 infection in men who have sex with men.

How tissues adapt to extreme cold is not well understood. Here, the authors discover a mechanism that promotes FOXO1-mediated cold survival gene transcription at low temperatures, with potential implications for long-term tissue storage for transplantation.

It is known that exercise influences many human traits, but not which tissues and genes are most important. This study connects transcriptome data collected across 15 tissues during exercise training in rats as part of the Molecular Transducers of Physical Activity Consortium with human data to identify traits with similar tissue specific gene expression signatures to exercise.

A generative AI approach is developed for predicting materials synthesis recipes—a complex challenge in materials science. Using this approach, the authors experimentally synthesized a material using AI-generated synthesis recipes.

Streptococcal S protein activates a peptidoglycan cell wall repair and modification complex to promote resistance of Streptococcus pneumoniae to lysozyme and LL-37, and increase virulence during infection.

Transcription factor osr2 is identified as a specific marker and regulator of mural lymphatic endothelial cell (muLEC) differentiation and maintenance, and muLECs and border-associated macrophages share functional analogies but are not homologous, providing an example of convergent evolution.

Inherited mitochondrial DNA mutations can result in diverse clinical phenotypes. Here, the authors characterise a heteroplasmic tRNA^Ala mutation (m.5019A>G) in mice and demonstrate that macrophages carrying this mutation display altered function and metabolism in vitro, along with increased type I IFN release following LPS challenge in vivo.

Sustainable and regenerative agriculture often employs diverse systems of crop rotation to reduce environmental impacts and sequester carbon. A long-term field study, however, reveals a trade-off between soil organic carbon storage and nitrogen supply.

Using a deep generative model, CellBender models and denoises droplet-based single-cell data and improves multiple downstream analyses.

Genetic association tests prioritize candidate genes based on different criteria.

A statistical approach to designing and predicting the fusion yield of cryogenic deuterium–tritium implosions leads to tripled yield in direct-drive laser fusion of deuterium–tritium layered targets.

Analysis of human Robertsonian chromosomes originating from 13, 14 and 21 reveal that they result from breaks at the SST1 macrosatellite DNA array and recombination between homologous sequences surrounding SST1.

Insects are crucial for ecosystem functioning but face multiple threats, including invasive alien species. Here the authors quantify impacts of invasive alien species on four insect orders, with effects varying by insect group and type of invader.

Interpreting spectroscopic data in real time remains a challenge in chemical characterization. Here a digital twin framework is developed that links first-principles theory and experimental data via a bidirectional feedback loop, enabling on-the-fly decision-making and insights into reaction mechanisms based on measured spectra during chemical experiments.

In a post-hoc analysis of circulating tumor DNA (ctDNA) features from patients with metastatic prostate cancer treated with [¹⁷⁷Lu]Lu–PSMA-617 or cabazitaxel in the randomized phase 2 TheraP trial, low ctDNA levels at baseline were predictive of clinical benefit from [¹⁷⁷Lu]Lu–PSMA-617, and PTEN or ATM alterations were identified as potential biomarkers of response.

Baysor enables cell segmentation based on transcripts detected by multiplexed FISH or in situ sequencing.

Self-oscillators are critical in various natural and engineered systems, as they enable complex collective behaviors through interactions among individual units. This study demonstrates that populations of Quincke colloids-self-oscillators whose back-and-forth motion defines both a phase and a nematic oscillation axis-can achieve a form of collective order, termed synchronematic order, characterized by hydrodynamic interactions that synchronize their oscillation phases and align their orientations.

Secretory autophagy (SA) plays a crucial role in neuroinflammation-driven neurodegeneration, through SKA2 and FKBP5. SKA2 regulation of SA can inhibit IL-1β release. Its dysfunction leads to neurodegeneration, and is linked to Alzheimer’s disease.

Assessing brain aging heterogeneity in a cohort of 49,482 individuals from 11 studies, a generative model identifies five dominant patterns of brain atrophy, with specific associations with biomedical, lifestyle and genetic factors.

Scholars have long disagreed about how best to achieve stable national democracy. Ruck et al. show that democratization follows from an intergenerational build-up of democratic cultural values, without which democracy is liable to fail.

Climate change threatens mountain ash (Eucalyptus regnans) forests, which are among Earth’s most carbon-dense ecosystems. This study finds that a projected 3^∘C warming by 2080 could reduce tree density and carbon storage in these forests by 24%

Here they combine in vivo imaging with proteomics to characterize a protein complex comprised of Ccdc78 and Ccdc33 that acts at the extreme distal tip of 9 + 2 motile cilia to control tip architecture, cilia length, and cilia beating.

SCIFER detects clonal selection in whole-genome sequencing data using a population genetics model. Applied to a range of somatic tissues, SCIFER quantifies stem cell dynamics and infers clonal ages and sizes without requiring knowledge of driver events.