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Showing 1–50 of 348 results
Advanced filters: Author: J. A. Combi Clear advanced filters
  • Current screens to assess tumour drug resistance require a large amount of material, normally not available from patients. Here the authors report CombiSeq, a scalable microfluidic workflow to screen hundreds of drug combinations in picoliter-size droplets using transcriptome changes as a readout.

    • L. Mathur
    • B. Szalai
    • C. A. Merten
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-15
  • Annunziato, Quan and Donckele et al. identify G3BP2 (Ras–GAP SH3 domain-binding protein 2) as a molecular glue-induced neosubstrate of the CRL4CRBN E3 ubiquitin ligase. The CRBN–glue neosurface uses a molecular surface mimicry mechanism to recruit and degrade G3BP2 in a compound-dependent manner.

    • Stefano Annunziato
    • Chao Quan
    • Georg Petzold
    ResearchOpen Access
    Nature Structural & Molecular Biology
    P: 1-9
  • Adjuvants are an important component of modern vaccines. Here, the authors employ a phenotypic screen of ~200k compounds and identify PVP-057, a TLR3 agonist with a simple scalable 3-step synthesis, as an adjuvant that induces durable humoral and cellular immunity to varicella-zoster virus (VZV) gE in mice.

    • Branden Lee
    • Danica Dong
    • David J. Dowling
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-17
  • LaccID, an engineered laccase, enables hydrogen-peroxide-free proximity labeling and electron microscopy (EM) in mammalian cells. Notably, LaccID is selectively active at the cell surface, enabling the mapping of the dynamic T cell–tumor surfaceome and its use as a genetically encodable EM tag, expanding the toolkit for cell-based imaging and proteomics.

    • Song-Yi Lee
    • Heegwang Roh
    • Alice Y. Ting
    ResearchOpen Access
    Nature Chemical Biology
    Volume: 21, P: 1895-1905
  • Here the authors perform a gene knockout screen in myeloid cells, identifying 295 genes regulating interleukin-1β production, of which 57 lie in regions associated with inflammatory disease risk. The study sheds light on genetic control of interleukin-1β in inflammation, beyond previously known factors.

    • Fedik Rahimov
    • Sujana Ghosh
    • Joshua D. Stender
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Design of cysteine-targeting analogs of a reversible SETDB1 triple Tudor domain (3TD) ligand, UNC6535, led to UNC10013, a potent covalent ligand with high selectivity. UNC10013 demonstrated allosteric inhibition of SETDB1-mediated Akt methylation in cells, a promising approach to SETDB1 therapeutics.

    • Mélanie Uguen
    • Devan J. Shell
    • Stephen V. Frye
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Cyclic GMP-AMP synthase (cGAS) is involved in the modulation of inflammatory responses. Here, the authors present small-molecule inhibitors of human cGAS, characterize their interaction with the protein, and show that the compounds are active in interferon-producing cells including primary human macrophages.

    • Lodoe Lama
    • Carolina Adura
    • Thomas Tuschl
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-14
  • Cells must sense heat quickly to protect their proteins and membranes. Here, the authors show that membrane stretch detected by the membrane sensor Mid2 promotes rapid phosphorylation of the Hsp70 chaperone to coordinate gene activity, protein synthesis and resolution of stress-induced protein droplets during heat shock.

    • Siddhi Omkar
    • Jake T. Kline
    • Andrew W. Truman
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-19
  • Malignant rhabdoid tumours (MRT) have been suggested to originate in the ectoderm-derived neural crest. Here, the authors analyse MRTs using phylogenetics, scRNA-seq, and patient-derived organoids; they find evidence for an MRT origin in the neural crest lineage and suggest differentiation treatment with HDAC/mTOR inhibitors.

    • Lars Custers
    • Eleonora Khabirova
    • Jarno Drost
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-11
  • Despite improving therapeutic options, the prognosis for patients with metastatic castration-resistance prostate cancer (mCRPC) remains poor. Here, the authors identify MCL1 copy number alterations as a prognostic and predictive biomarker, demonstrating its therapeutic potential as a drug target, either alone or in combination, in patients with mCRPC.

    • Juan M. Jiménez-Vacas
    • Daniel Westaby
    • Adam Sharp
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-22
  • Treatment with neoadjuvant BRAF/MEK-targeted therapy results in higher rates of major pathological response in female compared with male patients with melanoma, and pharmacological inhibition of androgen receptor signalling improved the responses of male and female mice to BRAF/MEK-targeted therapy.

    • Christopher P. Vellano
    • Michael G. White
    • Jennifer A. Wargo
    Research
    Nature
    Volume: 606, P: 797-803
  • Upon DNA binding cyclic GMP-AMP synthase (cGAS) produces a cyclic dinucleotide, which leads to the upregulation of inflammatory genes. Here the authors develop small molecule cGAS inhibitors, functionally characterize them and present the inhibitor and DNA bound cGAS crystal structures, which will facilitate drug development.

    • Jessica Vincent
    • Carolina Adura
    • Manuel Ascano
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-13
  • Quinone-based electrochemical systems can capture carbon dioxide but are limited by oxygen reactivity. Here, authors present a naphthoquinone and electrolyte design that improves oxygen tolerance while maintaining efficient carbon dioxide capture and concentration in aqueous flow cells.

    • Abdulrahman M. Alfaraidi
    • Nina Ni
    • Richard Y. Liu
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • Epigenetic changes are implicated in Acute myeloid leukemia (AML) tumorigenesis. Here, the authors show that the ubiquitin ligase RNF5 and its substrate RBBP4 contribute to AML development by regulating epigenetic-controlled transcription which determines AML sensitivity to HDAC inhibitors.

    • Ali Khateb
    • Anagha Deshpande
    • Ze’ev A. Ronai
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-17
  • Differential sensing aims to mimic senses such as taste and smell through the use of synthetic receptors. Here, the authors show that arrays of de novo designed peptide assemblies can be used as sensor components to distinguish various analytes and complex mixtures.

    • William M. Dawson
    • Kathryn L. Shelley
    • Derek N. Woolfson
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-12
  • CDK4/6 inhibition is a promising therapeutic approach to treat cancer, but it is challenged by resistance development. Here, the authors show that the RNA binding protein LRPPRC forms a positive feedback loop with CDK6 and inhibiting LRPPRC with the FDA-approved gossypol acetate overcomes CDK4/6 inhibition resistance.

    • Wei Zhou
    • Wenxi Wang
    • Xiaohong Fang
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-16
  • Whatever you are trying to make, the choice of materials is often bewildering. Novel combinatorial approaches allow you to reduce the time and costs necessary to optimize results, while stimulating the quest for deeper fundamental knowledge.

    • Eric J. Amis
    News & Views
    Nature Materials
    Volume: 3, P: 83-85
  • An NNMT inhibitor reduces tumour burden and metastasis in multiple mouse cancer models and restores immune checkpoint blockade efficacy by decreasing cancer-associated-fibroblast-mediated recruitment of myeloid-derived suppressor cells and reinvigorating CD8+ T cell activation.

    • Janna Heide
    • Agnes J. Bilecz
    • Ernst Lengyel
    Research
    Nature
    Volume: 645, P: 1051-1059
  • Effective treatments for atopic dermatitis (AD) are highly sought after. Here the authors develop ucenprubart (LY3454738) for treating AD and find, in a randomized, multiple arms, multicenter, placebo controlled, and dose-escalating phase 1 trial (NCT03750643) trial, ucenprubart to be safe and showing preliminary efficacy when compared with placebo at 12 weeks post treatment.

    • Anja Koester
    • Derrick R. Witcher
    • Ajay Nirula
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-15
  • TEAD transcription factors are critical effectors and druggable sites of the Hippo pathway in cancer, however, the development of small molecule inhibitors and degraders remains underexplored. Here, the authors identify and characterize bifunctional IAP-based degraders targeting TEAD1 via a lipid pocket and recruit different members of the inhibitor of apoptosis proteins (IAPs) family, offering a comprehensive toolkit for structural, biophysical and cellular profiling.

    • Nishma Gupta
    • Nicole Trainor
    • Michael J. Roy
    ResearchOpen Access
    Communications Chemistry
    Volume: 9, P: 1-23
  • Pharmacologic inhibition of dihydroorotate dehydrogenase (DHODH) shows limited efficacy in pancreatic ductal adenocarcinoma (PDAC) models. Here the authors find that targeting the anti-apoptotic protein BCL-XL synergizes with DHODH inhibition in promoting apoptosis in PDAC cells, patient-derived organoids, and PDAC mouse models.

    • Huan Zhang
    • Naiara Santana-Codina
    • Joseph D. Mancias
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-18
  • Patients with different small round cell sarcoma (SRCS) often receive the same treatment regimen but for some SRCS subtypes, response to chemotherapy is poor and targeted treatment options are limited. Here, the authors establish a biobank of paediatric patient-derived SRCS tumoroids and perform drug screening, identifying MCL inhibition as a potential therapeutic strategy in CIC::DUX4 sarcomas.

    • Femke C. A. S. Ringnalda
    • Gijs J. F. van Son
    • Hans Clevers
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Combination of drugs within cancer treatment is a popular way to overcome resistance and increase efficacy. Here, the authors analyse over 5000 targeted agent combinations in non-small cell lung cancer to identify potentially effective drug strategies.

    • Nishanth Ulhas Nair
    • Patricia Greninger
    • Cyril H. Benes
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-19
  • A novel antiviral targeting the SARS-CoV-2 PLpro protease shows strong efficacy in a mouse model, preventing lung pathology and reducing brain dysfunction. The study provides proof-of-principle that PLpro inhibition may be a viable strategy for preventing and treating long COVID.

    • Stefanie M. Bader
    • Dale J. Calleja
    • David Komander
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-20
  • High-content protein arrays were used to identify cysteine dioxygenase (CDO1) as a small-molecule glue target for the von Hippel–Lindau (VHL) E3 ubiquitin ligase and induces VHL-dependent proteasomal degradation of CDO1 in cells.

    • Antonin Tutter
    • Dennis Buckley
    • Gregory A. Michaud
    Research
    Nature Chemical Biology
    Volume: 21, P: 1688-1696
  • In less than a decade, the treatment landscape of metastatic melanoma has changed dramatically. Novel targeted agents and immunotherapies are revolutionizing patient outcomes, but the range of available drugs complicates clinical decision-making. Herein, the authors chart the therapeutic advances and review the current evidence that can be used to guide therapeutic decisions for individual patients with metastatic melanoma, highlighting knowledge gaps.

    • Jason J. Luke
    • Keith T. Flaherty
    • Georgina V. Long
    Reviews
    Nature Reviews Clinical Oncology
    Volume: 14, P: 463-482
  • Human proteases TMPRSS2 and TMPRSS11D can be highjacked to mediate cell entry of respiratory viruses. This study examines the biochemical and structural basis of TMPRSS11D auto-activation and substrate specificity, informing peptidomimetic inhibitor development.

    • Bryan J. Fraser
    • Ryan P. Wilson
    • Cheryl H. Arrowsmith
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-13
  • Oncolytic virus holds potential as a cancer therapy, but further optimization is desirable. Here the authors screen existing drug to find talazoparib, a PARP inhibitor, synergizing with reovirus type 3 Dearing (RT3D) to induce cancer cell apoptosis, anti-tumor immunity, as well as control of primary and rechallenge tumor in mouse models.

    • Joan Kyula-Currie
    • Victoria Roulstone
    • Kevin J. Harrington
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-19
  • This Resource presents the genetic subset of the 136,000 chemical and genetic perturbations tested by the Joint Undertaking for Morphological Profiling (JUMP) Cell Painting Consortium and associated analysis of phenotypic profiles.

    • Srinivas Niranj Chandrasekaran
    • Eric Alix
    • Anne E. Carpenter
    Research
    Nature Methods
    Volume: 22, P: 1742-1752
  • High-throughput screening identifies compounds that target insulin-degrading enzyme (IDE) and X-ray co-crystallography reveals how these compounds block insulin degradation by IDE but support its proteolysis of other substrates, including glucagon.

    • Juan Pablo Maianti
    • Grace A. Tan
    • David R. Liu
    Research
    Nature Chemical Biology
    Volume: 15, P: 565-574
  • The choroid plexus (ChP) provides molecular cues for brain development. However, the underlying mechanisms are unclear. This study identifies an apocrine secretion mechanism in the ChP that modulates the CSF protein composition and instructs cortical development.

    • Ya’el Courtney
    • Joshua P. Head
    • Maria K. Lehtinen
    ResearchOpen Access
    Nature Neuroscience
    Volume: 28, P: 1446-1459
  • Pattern recognition receptors (PRR) critically modulate innate immunity. Here the authors show in cancer cells that interferon responses and anti-tumor immunity activated by dsRNA-induced PRR signaling is enhanced by palbociclib-induced ER stress, with epigenetic changes and altered antigen presentation potentially contributing to this effect.

    • Victoria Roulstone
    • Joan Kyula-Currie
    • Kevin J. Harrington
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • Amide formation is a ubiquitous reaction in organic chemistry, but suffers from the problem of generating large amounts of waste. Here, the authors report a catalytic amide synthesis by the ruthenium catalysed addition of carboxylic acids to acetylenes, followed by reaction with primary or secondary amines.

    • Thilo Krause
    • Sabrina Baader
    • Lukas J. Gooßen
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-7
  • Cryo-EM reveals how transthyretin moves, offering insights into ligand binding and amyloidogenesis. The work highlights the utility of cryo-EM in studying small proteins and uncovering targets for structure-based drug design in transthyretin amyloidosis.

    • Benjamin Basanta
    • Karina Nugroho
    • Gabriel C. Lander
    Research
    Nature Structural & Molecular Biology
    Volume: 32, P: 876-883
  • CX-5461 recently progressed through phase I clinical trial as a first-inhuman inhibitor of RNA-POL I. Here, the authors demonstrate that CX-5461 synergizes with topoisomerase I inhibitors to inhibit neuroblastoma cells and that its primary target in this disease is topoisomerase II beta and not RNA-POL I.

    • Min Pan
    • William C. Wright
    • Paul Geeleher
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-20
  • Structural insights demonstrating small-molecule-mediated dimerization of BRD4 bromodomains led to the development of biBET, a compound that potently inhibits BRD4–acetyl-lysine interactions by bivalent binding to tandem bromodomains.

    • Michael J Waring
    • Huawei Chen
    • Yi Yao
    Research
    Nature Chemical Biology
    Volume: 12, P: 1097-1104
  • Pathogenic microbes can often attach to surfaces and form biofilms that display increased antibiotic resistance. Here, the authors characterize the biosynthesis of a new class of natural products, the cahuitamycins, that inhibit formation of biofilms by the pathogenic bacterium Acinetobacter baumannii.

    • Sung Ryeol Park
    • Ashootosh Tripathi
    • David H. Sherman
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-11