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Showing 51–100 of 406 results
Advanced filters: Author: Jimmy So Clear advanced filters
  • This work describes the Asgard superphylum, an assemblage of diverse archaea that comprises Odinarchaeota, Heimdallarchaeota, Lokiarchaeota and Thorarchaeota, offering insights into the earliest days of eukaryotic cells and their complex features.

    • Katarzyna Zaremba-Niedzwiedzka
    • Eva F. Caceres
    • Thijs J. G. Ettema
    Research
    Nature
    Volume: 541, P: 353-358
  • A genome-wide association study identifies 17 genetic loci that are associated with the risk of myeloproliferative neoplasms (MPNs), and shows that the modulation of haematopoietic stem cell function drives MPN risk.

    • Erik L. Bao
    • Satish K. Nandakumar
    • Vijay G. Sankaran
    Research
    Nature
    Volume: 586, P: 769-775
  • Phosphatase of regenerating liver 3 (PRL3) is usually found intracellularly, and is over-expressed in cancer cells. Here the authors show that PRL-3 is also detectable on cell surface, and can be recognized by PRL3-zumab to recruit immune cells into tumor to promote anti-tumor immunity, thereby implicating PRL-3 as a potential tumor antigen.

    • Min Thura
    • Abdul Qader Al-Aidaroos
    • Qi Zeng
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-14
  • Materials design and informatics have become increasingly prominent over the past several decades. Using the Materials Project as an example, this Perspective discusses how properties are calculated and curated, how this knowledge can be used for materials discovery, and the challenges in modelling complex material systems or managing software architecture.

    • Matthew K. Horton
    • Patrick Huck
    • Kristin A. Persson
    Reviews
    Nature Materials
    Volume: 24, P: 1522-1532
  • Effective therapeutic options are still needed in neuroblastoma treatment. Here, the authors, through a comprehensive proteomics analysis, identify ATR as a potential therapeutic target of neuroblastoma and demonstrate the efficacy of the ATR inhibitor BAY1895344 in combination with the ALK tyrosine kinase inhibitor lorlatinib.

    • Joanna Szydzik
    • Dan E. Lind
    • Ruth H. Palmer
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-18
  • A PAMless CRISPR nuclease is applied for precision DNA cleavage and cloning.

    • Kathleen A. Christie
    • Jimmy A. Guo
    • Benjamin P. Kleinstiver
    Research
    Nature Biotechnology
    Volume: 41, P: 409-416
  • The relative importance of the mechanisms underlying species radiation remains unclear. Here, the authors combine reference genome assembly and population genetics analyses to show that neutral forces have contributed to the radiation of the most species-rich tree genus Syzygium.

    • Yee Wen Low
    • Sitaram Rajaraman
    • Victor A. Albert
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-15
  • Interesting non-Hermitian quantum dynamics can be accessed in analogue quantum simulators consisting of Hermitian bosonic systems with squeezing and antisqueezing terms. Here, the authors use a coplanar waveguide resonator connected to a SQUID to simulate the bosonic version of the Kitaev chain.

    • Jamal H. Busnaina
    • Zheng Shi
    • Christopher M. Wilson
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-11
  • Lassa virus vaccination is impeded by the limited capacity of vaccine candidates to induce rapid protection. In this study, the authors found that a single shot of a measles-based Lassa vaccine protected nonhuman primates 16 or 8 days after vaccination.

    • Mathieu Mateo
    • Stéphanie Reynard
    • Sylvain Baize
    ResearchOpen Access
    Nature Communications
    Volume: 14, P: 1-18
  • A pentavalent live attenuated vaccine platform, MOPEVACNEW, was engineered to express glycoproteins from all five known pathogenic New World arenaviruses from a modified Mopeia virus. This approach induces robust antiviral antibody responses and sterile protection to prevent severe haemorrhagic fever and mortality in cynomolgus monkeys.

    • Stéphanie Reynard
    • Xavier Carnec
    • Sylvain Baize
    Research
    Nature Microbiology
    Volume: 8, P: 64-76
  • Mapping neuroanatomy is a foundational goal of connectomics, and the gold standard method is electron microscopy as light microscopy lacks nanoscale resolution. Here the authors develop a strategy using multicolor genetic labeling (Brainbow) and expansion microscopy to map putative synaptic connections using light microscopy.

    • Fred Y. Shen
    • Margaret M. Harrington
    • Dawen Cai
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Here, the authors apply live-cell and in situ fluorescence imaging at the single-molecule level to examine lambda DNA replication in single cells, finding that individual phage DNAs sequester host factors to their own vicinity and confine their replicated DNAs into separate compartments, suggesting that phage decision-making transcripts are spatially organized in separate compartments to allow distinct subcellular decisions to develop.

    • Jimmy T. Trinh
    • Qiuyan Shao
    • Lanying Zeng
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-11
  • A dataset of the genomes of 363 species from the Bird 10,000 Genomes Project shows increased power to detect shared and lineage-specific variation, demonstrating the importance of phylogenetically diverse taxon sampling in whole-genome sequencing.

    • Shaohong Feng
    • Josefin Stiller
    • Guojie Zhang
    Research
    Nature
    Volume: 587, P: 252-257
  • Nanomaterials have a range of potential applications, however, toxicity remains a concern, limiting application and requiring extensive testing. Here, the authors report on a predictive framework made using a range of tests linking materials properties with toxicity, allowing the prediction of toxicity from physiochemical and biological properties.

    • Vittorio Fortino
    • Pia Anneli Sofia Kinaret
    • Dario Greco
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-10
  • Activation of brown adipose tissue (BAT) reduces the development of atherosclerosis in animal models. Here the authors show that BAT activation also increases reverse cholesterol transport and turnover of high-density lipoprotein, which likely contributes to the anti-atherosclerotic effect of BAT activation.

    • Alexander Bartelt
    • Clara John
    • Joerg Heeren
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-10
  • This study identifies a clade of archaea that is the immediate sister group of eukaryotes in phylogenetic analyses, and that also has a repertoire of proteins otherwise characteristic of eukaryotes—proteins that would have provided the first eukaryotes with a ‘starter kit’ for the genomic and cellular complexity characteristic of the eukaryotic cell.

    • Anja Spang
    • Jimmy H. Saw
    • Thijs J. G. Ettema
    Research
    Nature
    Volume: 521, P: 173-179
  • Rinse Weersma, Carl Anderson and colleagues report the results of a trans-ancestry association study of inflammatory bowel disease. They implicate 38 new susceptibility loci, and show that the variance explained by each IBD risk locus is consistent across diverse ancestries, with a few notable exceptions.

    • Jimmy Z Liu
    • Suzanne van Sommeren
    • Rinse K Weersma
    Research
    Nature Genetics
    Volume: 47, P: 979-986
  • Formation of amyloid-beta (Aβ) oligomer pores in the membrane of neurons has been proposed to explain neurotoxicity in Alzheimer´s disease. Here authors present the 3D- structure of an Aβ oligomer formed in a membrane mimicking environment and observe that Aβ tetramers and octamers inserted into lipid bilayers as well-defined pores.

    • Sonia Ciudad
    • Eduard Puig
    • Natàlia Carulla
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • Data from more than 9,700 human stool and oral metagenomes has been used to decipher the strain transmission patterns of the human microbiome from mother to infant, within households and within populations.

    • Mireia Valles-Colomer
    • Aitor Blanco-Míguez
    • Nicola Segata
    ResearchOpen Access
    Nature
    Volume: 614, P: 125-135
  • Current methods for controlled assembly of nanomaterials into desired architectures often lack the precision and versatility to develop complex architectures. Here the authors report STAR, surfactant tunable spatial architecture, to guide nanomaterial integration in metal-organic frameworks.

    • Zhigang Wang
    • Haitao Zhao
    • Huilin Shao
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-12
  • Indoor residual spraying (IRS) of insecticide is one of the primary malaria vector control initiatives, but implementation is limited. Here, the authors show that discontinuation of IRS in Uganda was associated with increased malaria incidence, and introduction of IRS was associated with decreased incidence.

    • Jane F. Namuganga
    • Adrienne Epstein
    • Isabel Rodriguez-Barraquer
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-9
  • First-principles calculations reveal that hydrogen vacancies induce non-radiative losses in methylammonium lead iodide perovskites synthesized under iodine-poor conditions, whereas they are less detrimental in formamidinium-based hybrid perovskites.

    • Xie Zhang
    • Jimmy-Xuan Shen
    • Chris G. Van de Walle
    Research
    Nature Materials
    Volume: 20, P: 971-976
  • Observations of rapid repair of double-stranded DNA breaks in sister choromosomes in Escherichia coli are consistent with a reduced-dimensionality-search model of RecA-mediated repair.

    • Jakub Wiktor
    • Arvid H. Gynnå
    • Johan Elf
    ResearchOpen Access
    Nature
    Volume: 597, P: 426-429
  • Mutations in the GABA A receptor have been implicated in alcohol dependence in humans. In this study, the authors show that mice with mutations in the beta 1 subunit of the GABA A receptor exhibit spontaneous GABA A channel opening and preferentially consume alcohol, working harder to access it.

    • Quentin M. Anstee
    • Susanne Knapp
    • Howard C. Thomas
    Research
    Nature Communications
    Volume: 4, P: 1-11
  • Dengue and Zika virus are closely related flaviviruses but can have contrasting transmission dynamics in the same populations. Here, the authors use a model combining serological, surveillance and viral sequence data to explain differences in transmission dynamics in Fiji.

    • Alasdair D. Henderson
    • Mike Kama
    • Adam J. Kucharski
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-9
  • It is known that exercise influences many human traits, but not which tissues and genes are most important. This study connects transcriptome data collected across 15 tissues during exercise training in rats as part of the Molecular Transducers of Physical Activity Consortium with human data to identify traits with similar tissue specific gene expression signatures to exercise.

    • Nikolai G. Vetr
    • Nicole R. Gay
    • Stephen B. Montgomery
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-14
  • Analysis of rare coding variants in the UK Biobank identifies eight genes associated with adult cognitive function, including KDM5B. Rare and common variant signals overlap and contribute additively to the phenotype.

    • Chia-Yen Chen
    • Ruoyu Tian
    • Heiko Runz
    ResearchOpen Access
    Nature Genetics
    Volume: 55, P: 927-938
  • Analyses of multiple phylogenetic marker datasets of Asgard archaea provide insight into the transition from prokaryotes to eukaryotes, specifically placing eukaryotes within Asgard archaea and as a sister lineage to Hodarchaeales.

    • Laura Eme
    • Daniel Tamarit
    • Thijs J. G. Ettema
    ResearchOpen Access
    Nature
    Volume: 618, P: 992-999
  • The bacteriophage lambda and its hostEscherichia coli provide a model system to study cell-fate decisions. Here, Trinh et al. develop a four-colour fluorescence system at the single-cell/single-virus/single-viral-DNA level and find phages cooperate during lysogenization and compete during lysis.

    • Jimmy T. Trinh
    • Tamás Székely
    • Lanying Zeng
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-13
  • Understanding of photoionization dynamics, one of the fastest processes in nature, requires the characterization of all underlying ionization channels. Here the authors use an interferometry technique based on attosecond pulses to measure the phase and amplitude of the individual angular momentum channels in the photoionization of neon.

    • Jasper Peschel
    • David Busto
    • Per Eng-Johnsson
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-7
  • Acidic conditions present a solution to carbonate formation in CO2 electrolysis but create a selectivity issue through competing H2 evolution. Here, theoretical methods are used to optimize acidity and select Pd–Cu as a selective electrocatalyst for acidic CO2 reduction with negligible carbonate crossover and high single-pass carbon efficiency.

    • Yi Xie
    • Pengfei Ou
    • Edward H. Sargent
    Research
    Nature Catalysis
    Volume: 5, P: 564-570
  • Supported metal single-atom catalysts face challenges on both durability and practicality. Here, the authors demonstrate that a sustained 90% diesel oxidation conversion at ~160 oC is achieved by single-atom Pt on TiO2 nanowire-array integrated catalytic converter.

    • Son Hoang
    • Yanbing Guo
    • Pu-Xian Gao
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-10
  • Comprehensive integration of gene expression with epigenetic features is needed to understand the transition of kidney cells from health to injury. Here, the authors integrate dual single nucleus RNA expression and chromatin accessibility, DNA methylation, and histone modifications to decipher the chromatin landscape of the kidney in reference and adaptive injury cell states, identifying a transcription factor network of ELF3, KLF6, and KLF10 which regulates adaptive repair and maladaptive failed repair.

    • Debora L. Gisch
    • Michelle Brennan
    • Michael T. Eadon
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-21