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Showing 1–50 of 1164 results
Advanced filters: Author: K. Yao Clear advanced filters
  • Here, the authors map malignant and non-malignant cellular states in human glioma using integrated single-cell and spatial transcriptomics, revealing spatially organized tumor-microenvironment interactions and distinct oligodendrocyte-associated programs linked to disease progression.

    • Pranali Sonpatki
    • Hyun Jung Park
    • Nameeta Shah
    ResearchOpen Access
    Nature Communications
    P: 1-22
  • Spin-state crossovers are phenomena where, under changes in temperature or pressure, the spin-state of an ion changes. In some materials, this spin-state crossover occurs simultaneously with a metal-insulator transition, driven by a valence transition. Control over such valence, spin-state, and metal-insulator transitions has much technological appeal, but, thus far, materials displaying this have been limited to cryogenic temperatures. Here, the authors show that in strained films of (Pr1-yYy)1- xCaxCoO3-δ, these transitions can be promoted to room temperature.

    • Vipul Chaturvedi
    • Supriya Ghosh
    • Chris Leighton
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-12
  • Conventional slurry electrodes limit high-energy lithium batteries. This work shows that dry-processed electrodes with molecularly coupled carbon–binder networks enable high mass and active material loading, supporting stable high-voltage operation and enhancing battery energy density.

    • Minghao Zhang
    • Boyan K. Stoychev
    • Ying Shirley Meng
    Research
    Nature Energy
    P: 1-13
  • In one-shot perceptual learning, what we see can be dramatically altered by a single past experience. Using psychophysics, fMRI, iEEG, and DNNs, the authors identify neural and computational mechanisms underlying this remarkable ability in humans.

    • Ayaka Hachisuka
    • Jonathan D. Shor
    • Biyu J. He
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-21
  • Analysis combining multiple global tree databases reveals that whether a location is invaded by non-native tree species depends on anthropogenic factors, but the severity of the invasion depends on the native species diversity.

    • Camille S. Delavaux
    • Thomas W. Crowther
    • Daniel S. Maynard
    ResearchOpen Access
    Nature
    Volume: 621, P: 773-781
  • Identifying jets originating from heavy quarks plays a fundamental role in hadronic collider experiments. In this work, the ATLAS Collaboration describes and tests a transformer-based neural network architecture for jet flavour tagging based on low-level input and physics-inspired constraints.

    • G. Aad
    • E. Aakvaag
    • L. Zwalinski
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-22
  • Treekitkarnmongkol, Katayama, Sankaran et al. identify RASH3D19 as a downstream target for KRAS signalling through miR-301a, which in turn leads to RAS activation and tumorigenesis. Targeting RASH3D19 inhibits growth of KRAS-mutant tumour cells in vivo.

    • Warapen Treekitkarnmongkol
    • Hiroshi Katayama
    • Subrata Sen
    Research
    Nature Cell Biology
    Volume: 28, P: 197-206
  • The CMS Collaboration reports the measurement of the spin, parity, and charge conjugation properties of all-charm tetraquarks, exotic fleeting particles formed in proton–proton collisions at the Large Hadron Collider.

    • A. Hayrapetyan
    • V. Makarenko
    • A. Snigirev
    ResearchOpen Access
    Nature
    Volume: 648, P: 58-63
  • Improved vaccines and antivirals are needed for many enveloped viruses. Here, the authors identify sulfur-based small molecules that disrupt viral membrane properties, inhibiting fusion and entry, and safely inactivate influenza virus. The resulting inactivated influenza vaccine is protective in mice.

    • David W. Buchholz
    • Armando Pacheco
    • Hector C. Aguilar
    ResearchOpen Access
    Nature Communications
    Volume: 17, P: 1-14
  • Widespread ecosystem degradation demands scalable strategies for plant establishment — the process of successful seed dispersal and burial that enables a seed to germinate, survive its vulnerable early stages and emerge as a resilient seedling. However, harsh environmental conditions often make conventional seeding efforts costly and ineffective. Inspired by natural seeding mechanisms that exploit environmental cues, emerging biodegradable, stimulus-driven morphing matter-enabled machines can support plant establishment across its critical phases, offering a pathway to low-impact ecological restoration.

    • Qiuyu Lu
    • Semina Yi
    • Lining Yao
    Comments & Opinion
    Nature Reviews Materials
    P: 1-3
  • Integrative analyses of transcriptome and whole-genome sequencing data for 1,188 tumours across 27 types of cancer are used to provide a comprehensive catalogue of RNA-level alterations in cancer.

    • Claudia Calabrese
    • Natalie R. Davidson
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 129-136
  • The quark structure of the f0(980) hadron is still unknown after 50 years of its discovery. Here, the CMS Collaboration reports a measurement of the elliptic flow of the f0(980) state in proton-lead collisions at a nucleon-nucleon centre-of-mass energy of 8.16 TeV, providing strong evidence that the state is an ordinary meson.

    • A. Hayrapetyan
    • A. Tumasyan
    • A. Zhokin
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-19
  • Different ground states of high-temperature superconductors reveal complex nature of magnetism. Here, Wang et al. report stripe and Néel spin fluctuations coexisting with non-magnetic nematic phase in FeSe, providing a viewpoint towards understanding the magnetism of cuprate and iron-based superconductors.

    • Qisi Wang
    • Yao Shen
    • Jun Zhao
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-7
  • AIRES (algorithmic iterative reticular synthesis) is an integrated cycle combining automated synthesis, image recognition, single-crystal X-ray diffraction and algorithmic decision-making to maximize the discovery of distinct crystal structures. Demonstrated on zeolitic imidazolate frameworks, AIRES offers a systematic and efficient blueprint for reticular synthesis, with broad implications for accelerating materials discovery.

    • Zichao Rong
    • Zihao Chen
    • Omar M. Yaghi
    ResearchOpen Access
    Nature Synthesis
    P: 1-11
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • In this study the authors consider the structural variants (SVs) present within cancer cases of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium. They report hundreds of genes, including known cancer-associated genes for which the nearby presence of a SV breakpoint is associated with altered expression.

    • Yiqun Zhang
    • Fengju Chen
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-14
  • Here, the authors demonstrate a multi-momentum transformation metasurface. The orbital angular momentum meta-transformer reconstructs different vortex beams into on-axis distinct patterns, and the linear momentum meta-transformer converts red, green and blue beams to vivid color images.

    • Lei Jin
    • Yao-Wei Huang
    • Cheng-Wei Qiu
    ResearchOpen Access
    Nature Communications
    Volume: 10, P: 1-6
  • Interatomic Coulombic decay (ICD) is a relaxation of an atom in a weakly bound environment by the transfer of excess energy to ionize the neighbouring atom. Here the authors observe intra-Rydberg ICD in neon clusters, which is a decay that involves the ionization of Rydberg atoms in the cluster.

    • K. Nagaya
    • D. Iablonskyi
    • K. Ueda
    ResearchOpen Access
    Nature Communications
    Volume: 7, P: 1-6
  • Experimental measurements of high-order out-of-time-order correlators on a superconducting quantum processor show that these correlators remain highly sensitive to the quantum many-body dynamics in quantum computers at long timescales.

    • Dmitry A. Abanin
    • Rajeev Acharya
    • Nicholas Zobrist
    ResearchOpen Access
    Nature
    Volume: 646, P: 825-830
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • Whole-genome sequencing data for 2,778 cancer samples from 2,658 unique donors across 38 cancer types is used to reconstruct the evolutionary history of cancer, revealing that driver mutations can precede diagnosis by several years to decades.

    • Moritz Gerstung
    • Clemency Jolly
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 122-128
  • Hydrogel materials have emerged as versatile platforms for biomedical applications. Here this group reports an mRNA lipid nanoparticle-incorporated microgel matrix for immune cell recruitment/antigen expression and presentation/cellular interaction thereby eliciting antitumor efficacy with a single dose.

    • Yining Zhu
    • Zhi-Cheng Yao
    • Hai-Quan Mao
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • A new artificial intelligence model, DeepSeek-R1, is introduced, demonstrating that the reasoning abilities of large language models can be incentivized through pure reinforcement learning, removing the need for human-annotated demonstrations.

    • Daya Guo
    • Dejian Yang
    • Zhen Zhang
    ResearchOpen Access
    Nature
    Volume: 645, P: 633-638
  • Silencing of endogenous retroviral elements (ERVs) is mediated by KAP1. Here, the authors describe the molecular mechanism by which KAP1 induces structural reorganization and multimerization of HP1α and maintains inaccessible chromatin at ERVs in mouse embryonic stem cells.

    • Nitika Gaurav
    • Ryan O’Hara
    • Tatiana G. Kutateladze
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • In somatic cells the mechanisms maintaining the chromosome ends are normally inactivated; however, cancer cells can re-activate these pathways to support continuous growth. Here, the authors characterize the telomeric landscapes across tumour types and identify genomic alterations associated with different telomere maintenance mechanisms.

    • Lina Sieverling
    • Chen Hong
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • The transcription factor E2F is critical for determining cell proliferation. By monitoring E2F activity in single cells throughout the cell cycle, Dong et al.provide evidence that Myc and G1 cyclin/CDKs regulate different aspects of E2F temporal dynamics, resulting in distinct phenotypic outputs.

    • Peng Dong
    • Manoj V. Maddali
    • Lingchong You
    ResearchOpen Access
    Nature Communications
    Volume: 5, P: 1-11
  • Nodal line semimetals have been observed in three-dimensional materials but are missing in two-dimensional counterparts. Here, Feng et al. report two-dimensional Dirac nodal line fermions protected by mirror reflection symmetry in monolayer Cu2Si.

    • Baojie Feng
    • Botao Fu
    • Iwao Matsuda
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-6
  • Rabi oscillations of magnons typically do not have few photon control of single spin quantum systems. Here, the authors use a feedback cavity architecture to increase magnon-photon cooperativity, enabling increased control of light-matter interactions in magnonic systems via cooperative polariton dynamics.

    • Bimu Yao
    • Y. S. Gui
    • C. -M. Hu
    ResearchOpen Access
    Nature Communications
    Volume: 8, P: 1-6
  • A genome-wide association meta-analysis study of blood lipid levels in roughly 1.6 million individuals demonstrates the gain of power attained when diverse ancestries are included to improve fine-mapping and polygenic score generation, with gains in locus discovery related to sample size.

    • Sarah E. Graham
    • Shoa L. Clarke
    • Cristen J. Willer
    Research
    Nature
    Volume: 600, P: 675-679
  • At cell–cell adhesions, α-catenin contains a cryptic vinculin-binding site. Here, Yao et al. demonstrate, using magnetic tweezers, that physiologically relevant forces unfurl α-catenin to reveal the vinculin-binding site, and allow the reversible binding of vinculin to mechanically reinforce the adhesion.

    • Mingxi Yao
    • Wu Qiu
    • Jie Yan
    Research
    Nature Communications
    Volume: 5, P: 1-12
  • Correlated errors coming from leakage out of the computational subspace are an obstacle to fault-tolerant superconducting circuits. Here, the authors use a multi-level reset protocol to improve the performances of a bit-flip error correcting code by reducing the magnitude of correlations.

    • M. McEwen
    • D. Kafri
    • R. Barends
    ResearchOpen Access
    Nature Communications
    Volume: 12, P: 1-7
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • Cancers evolve as they progress under differing selective pressures. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium, the authors present the method TrackSig the estimates evolutionary trajectories of somatic mutational processes from single bulk tumour data.

    • Yulia Rubanova
    • Ruian Shi
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12