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Showing 1–14 of 14 results

Advanced filters: Author: Nathan C. VerBerkmoes Clear advanced filters

Environmental proteomics of microbial plankton in a highly productive coastal upwelling system

Sarah M Sowell
Paul E Abraham
Stephen J Giovannoni
Research11 Nov 2010
The ISME Journal

Volume: 5, P: 856-865
Strain-resolved community proteomics reveals recombining genomes of acidophilic bacteria

Ian Lo
Vincent J. Denef
Jillian F. Banfield
Research07 Mar 2007
Nature

Volume: 446, P: 537-541
Sustainable syntrophic growth of Dehalococcoides ethenogenes strain 195 with Desulfovibrio vulgaris Hildenborough and Methanobacterium congolense: global transcriptomic and proteomic analyses

Yujie Men
Helene Feil
Lisa Alvarez-Cohen
Research01 Sept 2011
The ISME Journal

Volume: 6, P: 410-421
Discovery of a novel methanogen prevalent in thawing permafrost

The microbes responsible for releasing the potent greenhouse gas methane from thawing permafrost remain largely unknown. Mondav and Woodcroft et al. investigate methane flux across a thaw gradient in Sweden and recover a near-complete genome of the dominant methanogen Candidatus ‘Methanoflorens stordalenmirensis’.

Rhiannon Mondav
Ben J. Woodcroft
Gene W. Tyson
Research14 Feb 2014
Nature Communications

Volume: 5, P: 1-7
Biostimulation induces syntrophic interactions that impact C, S and N cycling in a sediment microbial community

Kim M Handley
Nathan C VerBerkmoes
Jillian F Banfield
Research29 Nov 2012
The ISME Journal

Volume: 7, P: 800-816
Microbes in thawing permafrost: the unknown variable in the climate change equation

David E Graham
Matthew D Wallenstein
Janet K Jansson
Comments & Opinion17 Nov 2011
The ISME Journal

Volume: 6, P: 709-712
Posttranslational modification and sequence variation of redox-active proteins correlate with biofilm life cycle in natural microbial communities

Steven W Singer
Brian K Erickson
Michael P Thelen
Research20 May 2010
The ISME Journal

Volume: 4, P: 1398-1409
Cultivation and quantitative proteomic analyses of acidophilic microbial communities

Christopher P Belnap
Chongle Pan
Jillian F Banfield
Research24 Dec 2009
The ISME Journal

Volume: 4, P: 520-530
Functional analysis of natural microbial consortia using community proteomics

It is not easy to study how microbial communities function. Microbial community proteogenomics, which integrates genomics, ecology, biological mass spectrometry and informatics, could help us to unravel the physiology, ecology and evolution of microbial populations and communities.

Nathan C. VerBerkmoes
Vincent J. Denef
Jillian F. Banfield
Reviews01 Mar 2009
Nature Reviews Microbiology

Volume: 7, P: 196-205
Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes

A multi-omics approach, integrating metagenomics, metatranscriptomics and metaproteomics, determines the phylogenetic composition of the microbial community and assesses its functional potential and activity along a thaw transition from intact permafrost to thermokast bog.

Jenni Hultman
Mark P. Waldrop
Janet K. Jansson
Research04 Mar 2015
Nature

Volume: 521, P: 208-212
Shotgun metaproteomics of the human distal gut microbiota

Nathan C Verberkmoes
Alison L Russell
Janet K Jansson
Research30 Oct 2008
The ISME Journal

Volume: 3, P: 179-189
Creating and characterizing communities of human gut microbes in gnotobiotic mice

Jeremiah J Faith
Federico E Rey
Jeffrey I Gordon
Comments & Opinion22 Jul 2010
The ISME Journal

Volume: 4, P: 1094-1098
Cytochrome 572 is a conspicuous membrane protein with iron oxidation activity purified directly from a natural acidophilic microbial community

Chris Jeans
Steven W Singer
Michael P Thelen
Research28 Feb 2008
The ISME Journal

Volume: 2, P: 542-550
Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal

Paul Wilmes
Anders F Andersson
Jillian F Banfield
Research01 May 2008
The ISME Journal

Volume: 2, P: 853-864