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Showing 1–50 of 606 results
Advanced filters: Author: Xuan Hong Clear advanced filters
  • Hong-Xuan Lin, Ji-Ping Gao, Jun-Xiang Shan and colleagues show that natural variation in a proteasome α2 subunit gene contributes to thermotolerance in African rice. Their follow-up studies suggest that the variant allele protects cells from heat stress by enhancing the elimination of cytotoxic denatured proteins and maintaining heat-response processes.

    • Xin-Min Li
    • Dai-Yin Chao
    • Hong-Xuan Lin
    Research
    Nature Genetics
    Volume: 47, P: 827-833
  • In this Perspective, members of the Aging Biomarker Consortium outline the X-Age Project, an Aging Biomarker Consortium plan for building standardized aging clocks in China. The authors discuss the project roadmap and its aims of decoding aging heterogeneity, detecting accelerated aging early and evaluating geroprotective interventions.

    • Jiaming Li
    • Mengmeng Jiang
    • Guang-Hui Liu
    Reviews
    Nature Aging
    Volume: 5, P: 1669-1685
  • Advances have been made in thin-film piezoelectrics; however, the linearity of electric-field-induced strain with frequency and temperature still requires improvement. Here, by growing interlocked monoclinic and tetragonal polar nanoregions in (K,Na)NbO3 thin films, highly linear strains of up to 1.1% are reported at frequencies up to 105 Hz.

    • Yue-Yu-Shan Cheng
    • Xiaoming Shi
    • Jing-Feng Li
    Research
    Nature Materials
    P: 1-7
  • Single-cell transcriptomic profiling of immune cells in the blood and liver of a human decedent receiving a pig liver xenograft reveals impaired adaptive immunity and monocyte features that may induce T cell exhaustion and contribute to platelet activation.

    • Kai-Shan Tao
    • Yu-Wei Ling
    • Lin Wang
    Research
    Nature Medicine
    Volume: 31, P: 2611-2621
  • The authors introduce a structural design with a well-ordered local structure for barium titanate-based ceramics, which decreases Curie temperature while preserves a sharp phase transition, enabling tunable polarization, large dielectric constant and intrinsic electrocaloric effect near room temperature.

    • Bo Wu
    • Hong Tao
    • Shujun Zhang
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • Water has a role to play in the future of cooling but is currently limited by the lack of meaningful control methods. Here, authors demonstrate the ability of electrostatic fields to act as a catalyst for water-based evaporative cooling, paving the way for widescale adoption of evaporative cooling.

    • Jun Yan Tan
    • Jason Jovi Brata
    • Hong Li
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-11
  • The authors propose a set of guidelines for far-UVC optical design, under which the multi-stimulated far-UVC luminescence at 222 nm in Pr3+ -doped SrF2 is realized, offering unique opportunities for solar-blind imaging and structural health monitoring in complex environments.

    • Chongyang Cai
    • Leipeng Li
    • Yanmin Yang
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • Catalytic asymmetric click reactions of azides and alkynes for chiral triazole synthesis remains a challenge, due to the limited catalytic systems and substrate scope. Herein, the authors report the enantioselective azidation/click cascade reaction of N-propargyl-β-ketoamides via copper catalysis, affording a variety of chiral 1,2,3-triazoles.

    • Ling-Feng Jiang
    • Shao-Hua Wu
    • Qing-Hai Deng
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-8
  • Geospatial estimates of the prevalence of anemia in women of reproductive age across 82 low-income and middle-income countries reveals considerable heterogeneity and inequality at national and subnational levels, with few countries on track to meet the WHO Global Nutrition Targets by 2030.

    • Damaris Kinyoki
    • Aaron E. Osgood-Zimmerman
    • Simon I. Hay
    ResearchOpen Access
    Nature Medicine
    Volume: 27, P: 1761-1782
  • A gene-edited pig liver transplanted into a human recipient remains functional after 10 days and indicates that porcine organs could help meet the growing demand for liver transplants.

    • Kai-Shan Tao
    • Zhao-Xu Yang
    • Ke-Feng Dou
    ResearchOpen Access
    Nature
    Volume: 641, P: 1029-1036
  • Nanopore direct RNA sequencing is promising for epitranscriptome study but remains limited in single-molecule resolution. Here, the authors develop SingleMod, a tool for accurate single-molecule m6A detection from DRS and reveal cross-species epitranscriptome landscapes at single-molecule level.

    • Ying-Yuan Xie
    • Zhen-Dong Zhong
    • Guan-Zheng Luo
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • The authors present SVclone, a computational method for inferring the cancer cell fraction of structural variants from whole-genome sequencing data.

    • Marek Cmero
    • Ke Yuan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-15
  • Achieving fairness while preserving privacy in medical imaging tasks remains a significant challenge. Here, the authors present and comprehensively evaluate a federated learning framework to tackle both fairness and privacy issues, using a flexible regularization term to integrate multiple fairness criteria.

    • Huijun Xing
    • Rui Sun
    • Zhen Li
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-12
  • Here the authors show that PD-1 controls coinhibitory receptor expression by Treg cells. The absence of PD-1 expression could induce CD30 expression, thereby enhancing Treg function and tumor escape, suggesting that CD30 might be a therapeutic target in cases of anti-PD-1 resistance.

    • Jing Xuan Lim
    • Tegan McTaggart
    • Shoba Amarnath
    ResearchOpen Access
    Nature Immunology
    Volume: 26, P: 1074-1086
  • Authors use a high-entropy engineering approach to produce fully amorphous BiTO films by exfoliation and annealing, creating crystalline regions, leading to flexible ceramics with dielectric properties.

    • Lvye Dou
    • Bingbing Yang
    • Yuan-Hua Lin
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-10
  • Helicobacter pylori (H. pylori) establishes chronic infection in human, but the underlying mechanistic insights are lacking. Here the authors use single cell RNA and TCR sequencing to profile peripheral blood and mucosal cells from infected patients to report alterations in macrophage differentiation and T cell gene signature that may contribute to persisting H. pylori infection.

    • Wei Hu
    • Ze Min Chen
    • Wei Gong
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-16
  • Hou, Chen et al. show that aged bone marrow macrophages propagate senescence to multiple tissues in vivo, through extracellular vesicles containing PPARα-targeted microRNAs. They demonstrate the therapeutic potential of intervening in this process using the PPARα agonist fenofibrate.

    • Jing Hou
    • Kai-Xuan Chen
    • Chang-Jun Li
    ResearchOpen Access
    Nature Aging
    Volume: 4, P: 1562-1581
  • Wang et al. demonstrate that the vascular smooth muscle cell–dependent expression of TRPM7, an ion channel with kinase function, increases the levels of calcium and zinc and, thus, increases the MMP2 activity and contributes to the formation of abdominal aortic aneurysm.

    • Xuan Wang
    • Mi Wang
    • Zheng Zhang
    Research
    Nature Cardiovascular Research
    Volume: 4, P: 216-234
  • Understanding deregulation of biological pathways in cancer can provide insight into disease etiology and potential therapies. Here, as part of the PanCancer Analysis of Whole Genomes (PCAWG) consortium, the authors present pathway and network analysis of 2583 whole cancer genomes from 27 tumour types.

    • Matthew A. Reyna
    • David Haan
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-17
  • Analyses of 2,658 whole genomes across 38 types of cancer identify the contribution of non-coding point mutations and structural variants to driving cancer.

    • Esther Rheinbay
    • Morten Muhlig Nielsen
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 102-111
  • The flagship paper of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes Consortium describes the generation of the integrative analyses of 2,658 cancer whole genomes and their matching normal tissues across 38 tumour types, the structures for international data sharing and standardized analyses, and the main scientific findings from across the consortium studies.

    • Lauri A. Aaltonen
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 82-93
  • Integrative analyses of transcriptome and whole-genome sequencing data for 1,188 tumours across 27 types of cancer are used to provide a comprehensive catalogue of RNA-level alterations in cancer.

    • Claudia Calabrese
    • Natalie R. Davidson
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 129-136
  • Analysis of cancer genome sequencing data has enabled the discovery of driver mutations. Here, as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium the authors present DriverPower, a software package that identifies coding and non-coding driver mutations within cancer whole genomes via consideration of mutational burden and functional impact evidence.

    • Shimin Shuai
    • Federico Abascal
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-12
  • Multi-omics datasets pose major challenges to data interpretation and hypothesis generation owing to their high-dimensional molecular profiles. Here, the authors develop ActivePathways method, which uses data fusion techniques for integrative pathway analysis of multi-omics data and candidate gene discovery.

    • Marta Paczkowska
    • Jonathan Barenboim
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-16
  • Non f-electron systems containing narrow electronic band and localized moments are a useful platform to study the Kondo lattice problem. Here, by using scanning tunneling microscopy, the authors show a transition from the insulating gap to a tuneable Kondo resonance in 1T-TaS2 by Pb intercalation.

    • Shiwei Shen
    • Chenhaoping Wen
    • Shichao Yan
    ResearchOpen Access
    Nature Communications
    Volume: 13, P: 1-7
  • A high-resolution, global atlas of mortality of children under five years of age between 2000 and 2017 highlights subnational geographical inequalities in the distribution, rates and absolute counts of child deaths by age.

    • Roy Burstein
    • Nathaniel J. Henry
    • Simon I. Hay
    ResearchOpen Access
    Nature
    Volume: 574, P: 353-358
  • Nonalcoholic fatty liver disease (NAFLD) has limited dietary treatment options. Here, the authors show that torularhodin, a microbial carotenoid, alleviates NAFLD by enriching Akkermansia muciniphila and promoting adenosylcobalamin synthesis, which reduces ceramides via HIF-2α inhibition.

    • Chang Liu
    • Xiaojiao Zheng
    • He Qian
    ResearchOpen Access
    Nature Communications
    Volume: 16, P: 1-17
  • Over-application of nitrogen fertilizer leads to environmental problems in modern agricultural systems. The mining of favourable gene variants for nitrogen-use efficiency is a fundamental way to tackle these dangers.

    • Dai-Yin Chao
    • Hong-Xuan Lin
    News & Views
    Nature Plants
    Volume: 1, P: 1-2
  • There’s an emerging body of evidence to show how biological sex impacts cancer incidence, treatment and underlying biology. Here, using a large pan-cancer dataset, the authors further highlight how sex differences shape the cancer genome.

    • Constance H. Li
    • Stephenie D. Prokopec
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-24
  • With the generation of large pan-cancer whole-exome and whole-genome sequencing projects, a question remains about how comparable these datasets are. Here, using The Cancer Genome Atlas samples analysed as part of the Pan-Cancer Analysis of Whole Genomes project, the authors explore the concordance of mutations called by whole exome sequencing and whole genome sequencing techniques.

    • Matthew H. Bailey
    • William U. Meyerson
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-27
  • Single cell transcriptomics can reveal at high resolution the body’s response to infection. Here the authors have applied this technology to a longitudinal SARS-CoV-2 infected cohort and identified gene expression changes that may predict disease severity and reveal the underlying molecular mechanisms.

    • Quy Xiao Xuan Lin
    • Deepa Rajagopalan
    • Shyam Prabhakar
    ResearchOpen Access
    Nature Communications
    Volume: 15, P: 1-19
  • In somatic cells the mechanisms maintaining the chromosome ends are normally inactivated; however, cancer cells can re-activate these pathways to support continuous growth. Here, the authors characterize the telomeric landscapes across tumour types and identify genomic alterations associated with different telomere maintenance mechanisms.

    • Lina Sieverling
    • Chen Hong
    • Christian von Mering
    ResearchOpen Access
    Nature Communications
    Volume: 11, P: 1-13
  • Whole-genome sequencing data from more than 2,500 cancers of 38 tumour types reveal 16 signatures that can be used to classify somatic structural variants, highlighting the diversity of genomic rearrangements in cancer.

    • Yilong Li
    • Nicola D. Roberts
    • Christian von Mering
    ResearchOpen Access
    Nature
    Volume: 578, P: 112-121
  • Viral pathogen load in cancer genomes is estimated through analysis of sequencing data from 2,656 tumors across 35 cancer types using multiple pathogen-detection pipelines, identifying viruses in 382 genomic and 68 transcriptome datasets.

    • Marc Zapatka
    • Ivan Borozan
    • Christian von Mering
    ResearchOpen Access
    Nature Genetics
    Volume: 52, P: 320-330