Nature Search

Genome-wide mapping of RNA-protein associations through sequencing

A resource of human RNA-protein associations is produced using a sequencing-based method.

Zhijie Qi
Shuanghong Xue
Sheng Zhong
Research09 Sept 2025
Nature Biotechnology

P: 1-11
Ingestible optoelectronic capsules enable bidirectional communication with engineered microbes for controllable therapeutic interventions

A smartphone-controlled ingestible capsule can have a two-way communication with engineered microbes inside the gut via light-induced signals.

Xinyu Zhang
Zhijie Feng
Hanjie Wang
Research28 Jul 2025
Nature Microbiology

Volume: 10, P: 1841-1853
Author Correction: On-surface synthesis of triangulene trimers via dehydration reaction

Suqin Cheng
Zhijie Xue
Ping Yu
Amendments and CorrectionsOpen Access01 Apr 2025
Nature Communications

Volume: 16, P: 1
Lithium intercalated FeSe as a high-temperature superconducting ferromagnet

The authors find that electric-field gating-controlled lithium intercalation can switch FeSe reversibly between a nonmagnetic superconducting state and a high-temperature superconducting ferromagnetic state. Further, scanning-SQUID magnetometry reveals that the ferromagnetic domains survive deep in the Meissner state and coexist spatially.

Yi Hu
Keyi Liang
Ding Zhang
ResearchOpen Access07 Aug 2025
Nature Communications

Volume: 16, P: 1-9
On-surface synthesis of triangulene trimers via dehydration reaction

Preparing triangulene-based high spin structures is of interest for molecular spintronics. Here, the authors generate high spin triangulene trimers on Au(111) via a surface-assisted dehydration reaction.

Suqin Cheng
Zhijie Xue
Ping Yu
ResearchOpen Access31 Mar 2022
Nature Communications

Volume: 13, P: 1-7
NAD⁺-dependent Sirt6 is a key regulator involved in telomere shortening of in vitro-cultured preimplantation embryos

NAD⁺ deficiency impairing Sirt6 function reveals the mechanism of in vitro culture-induced telomere shortening in preimplantation embryos, providing a target to improve IVF outcomes.

Danjun Li
Wenzhi Li
Qifeng Lyu
ResearchOpen Access23 Aug 2025
Communications Biology

Volume: 8, P: 1-15
Parallel comparison of T cell and B cell subpopulations of adenoid hypertrophy and tonsil hypertrophy of children

Adenoids and tonsils in children can become hypertrophic because of multiple infections. Here the authors use single cell transcriptomics to assess the immune cell composition of these hypertrophic organs and find B, T and NK cells and exhausted memory CD4 T cells indicating immune changes in these organs associated with respiratory infection.

Zihui Yu
Ziying Xu
Jing Yuan
ResearchOpen Access14 Apr 2025
Nature Communications

Volume: 16, P: 1-19
Biodiversity increases resistance of grasslands against plant invasions under multiple environmental changes

Species-rich communities tend to be less vulnerable to species invasions, but whether this is maintained under environmental stress is unclear. This meta-analysis shows that the positive effect of biodiversity on resistance to invasion in grassland plant communities is reduced by drought but increased by warming and multiple global change factors.

Cai Cheng
Zekang Liu
Jihua Wu
ResearchOpen Access27 May 2024
Nature Communications

Volume: 15, P: 1-10
Sulfate formation is dominated by manganese-catalyzed oxidation of SO₂ on aerosol surfaces during haze events

Sulfate aerosols are an important component of wintertime haze events in China, but their production mechanisms are not well known. Here, the authors show that transition metal-catalyzed oxidation of SO₂ on aerosol surfaces could be the dominant sulfate formation pathway in Northern China.

Weigang Wang
Mingyuan Liu
Maofa Ge
ResearchOpen Access31 Mar 2021
Nature Communications

Volume: 12, P: 1-10
Real-time mass spectrometric characterization of the solid–electrolyte interphase of a lithium-ion battery

An operando mass spectrometry technique, along with molecular dynamics simulations, unveils the evolution of the solid–electrolyte interphase chemistry and structure in lithium-ion batteries during the first cycle.

Yufan Zhou
Mao Su
Zihua Zhu
Research27 Jan 2020
Nature Nanotechnology

Volume: 15, P: 224-230
Two-way magnetic resonance tuning and enhanced subtraction imaging for non-invasive and quantitative biological imaging

A distance-dependent two-way magnetic resonance tuning platform combined with dual-contrast enhanced subtraction imaging enables quantitative sensing and imaging in deep tissues with minimal background noise.

Zhongling Wang
Xiangdong Xue
Yuanpei Li
Research25 May 2020
Nature Nanotechnology

Volume: 15, P: 482-490
Genome-wide analysis of the interplay between chromatin-associated RNA and 3D genome organization in human cells

How chromatin-associated RNAs (caRNAs) are spatially organized in the context of the multiscale genome architecture is unclear. Here the authors suggest how the 3D genome architecture can modulate the spatial distribution of caRNAs at different scales, and how in turn caRNA could affect the dynamic 3D genome organization.

Riccardo Calandrelli
Xingzhao Wen
Sheng Zhong
ResearchOpen Access16 Oct 2023
Nature Communications

Volume: 14, P: 1-14
Assessment of surface sediment properties and heavy metal contamination in typical urban areas of the Yellow River, China

Junzhang Wang
Ling Tao
Jun Ren
ResearchOpen Access19 Mar 2025
Scientific Reports

Volume: 15, P: 1-10
Analysis of overlapping heterozygous novel submicroscopic CNVs and FANCA–VPS9D1 fusion transcripts in a Fanconi anemia patient

Daijing Nie
Panxiang Cao
Hongxing Liu
Research26 Jun 2019
Journal of Human Genetics

Volume: 64, P: 899-909
Enhancer reprogramming driven by high-order assemblies of transcription factors promotes phenotypic plasticity and breast cancer endocrine resistance

Bi et al. reveal a coordinated function for GATA3 and AP1 in altering enhancer landscapes, thereby promoting a basal/mesenchymal phenotype and endocrine resistance in breast cancer.

Mingjun Bi
Zhao Zhang
Zhijie Liu
Research18 May 2020
Nature Cell Biology

Volume: 22, P: 701-715
Ortho-C–H methoxylation of aryl halides enabled by a polarity-reversed N–O reagent

Pd/norbornene cooperative catalysis provides a strategy for arene functionalization, but the electrophile scope is typically limited to ‘soft’ elements such as carbon, nitrogen and sulfur. Now the ortho-C–H methoxylation of aryl halides has been realized using a polarity-reversed N−O reagent and facilitated by a C7-bromo-substituted norbornene mediator.

Xin Liu
Yue Fu
Guangbin Dong
Research31 Aug 2023
Nature Chemistry

Volume: 15, P: 1391-1399
A molecular pathway for CO₂ response in Arabidopsis guard cells

Carbon dioxide influences plant–water relations and gas exchange by regulating stomatal aperture. Here, Tian et al. characterize RHC1, a MATE family transporter that under elevated carbon dioxide concentrations promotes stomatal closure via activation of the SLAC1 anion channel.

Wang Tian
Congcong Hou
Sheng Luan
Research20 Jan 2015
Nature Communications

Volume: 6, P: 1-10
Targeting tumor-intrinsic S100 calcium-binding protein A1 augments antitumor immunity and potentiates immunotherapy efficacy

Yufeng Guo
Rui Wan
Jie Wang
ResearchOpen Access17 Mar 2025
Signal Transduction and Targeted Therapy

Volume: 10, P: 1-15
CREPT/RPRD1B associates with Aurora B to regulate Cyclin B1 expression for accelerating the G2/M transition in gastric cancer

Lidan Ding
Liu Yang
Zhijie Chang
ResearchOpen Access05 Dec 2018
Cell Death & Disease

Volume: 9, P: 1-15
Transfer cells mediate nitrate uptake to control root nodule symbiosis

Symbiotic rhizobium bacteria are hosted in root nodules in legumes. In Medicago, NPF7.6 is a high-affinity nitrate transporter that is expressed in nodule transfer cells. It is vital for correct uptake of nitrate by nodules and for their development.

Qi Wang
Yige Huang
Zhaosheng Kong
Research08 Jun 2020
Nature Plants

Volume: 6, P: 800-808
R406 elicits anti-Warburg effect via Syk-dependent and -independent mechanisms to trigger apoptosis in glioma stem cells

Shuxin Sun
Dongdong Xue
Ke Sai
ResearchOpen Access01 May 2019
Cell Death & Disease

Volume: 10, P: 1-16
Juxtamembrane 2 mimic peptide competitively inhibits mitochondrial trafficking and activates ROS-mediated apoptosis pathway to exert anti-tumor effects

Dan He
Zhijie Ma
Haiyan Li
ResearchOpen Access24 Mar 2022
Cell Death & Disease

Volume: 13, P: 1-13
TRPV1⁺ sensory nerves modulate corneal inflammation after epithelial abrasion via RAMP1 and SSTR5 signaling

Jun Liu
Shuoya Huang
Zhijie Li
Research09 Jun 2022
Mucosal Immunology

Volume: 15, P: 867-881
Acute tobacco smoke exposure exacerbates the inflammatory response to corneal wounds in mice via the sympathetic nervous system

Chengju Xiao et al. find that acute tobacco smoke exaggerates inflammation in recently wounded mouse corneas, thereby impairing wound repair. They show that the effect of tobacco smoke is mediated by activation of the sympathetic nervous system.

Chengju Xiao
Mingjuan Wu
Zhijie Li
ResearchOpen Access24 Jan 2019
Communications Biology

Volume: 2, P: 1-18
Antibiotic-induced dysbiosis of gut microbiota impairs corneal development in postnatal mice by affecting CCR2 negative macrophage distribution

Mingjuan Wu
Jun Liu
Zhijie Li
ResearchOpen Access21 Aug 2019
Mucosal Immunology

Volume: 13, P: 47-63
The mouse autonomic nervous system modulates inflammation and epithelial renewal after corneal abrasion through the activation of distinct local macrophages

Yunxia Xue
Jingxin He
Zhijie Li
ResearchOpen Access09 Jul 2018
Mucosal Immunology

Volume: 11, P: 1496-1511
Epothilone B Speeds Corneal Nerve Regrowth and Functional Recovery through Microtubule Stabilization and Increased Nerve Beading

Hanqing Wang
Chengju Xiao
Zhijie Li
ResearchOpen Access08 Feb 2018
Scientific Reports

Volume: 8, P: 1-14
Single-cell RNA sequencing deciphers the mechanism of sepsis-induced liver injury and the therapeutic effects of artesunate

Xue-ling He
Jia-yun Chen
Ji-gang Wang
Research11 Apr 2023
Acta Pharmacologica Sinica

Volume: 44, P: 1801-1814
Mast Cells Participate in Corneal Development in Mice

Jun Liu
Ting Fu
Zhijie Li
ResearchOpen Access02 Dec 2015
Scientific Reports

Volume: 5, P: 1-14
Insulin Restores an Altered Corneal Epithelium Circadian Rhythm in Mice with Streptozotocin-induced Type 1 Diabetes

Fang Song
Yunxia Xue
Zhijie Li
ResearchOpen Access09 Sept 2016
Scientific Reports

Volume: 6, P: 1-9
Spatially defined single-cell transcriptional profiling characterizes diverse chondrocyte subtypes and nucleus pulposus progenitors in human intervertebral discs

Yibo Gan
Jian He
Peng Liu
ResearchOpen Access16 Aug 2021
Bone Research

Volume: 9, P: 1-15

Search

Genome-wide mapping of RNA-protein associations through sequencing

Ingestible optoelectronic capsules enable bidirectional communication with engineered microbes for controllable therapeutic interventions

Author Correction: On-surface synthesis of triangulene trimers via dehydration reaction

Lithium intercalated FeSe as a high-temperature superconducting ferromagnet

On-surface synthesis of triangulene trimers via dehydration reaction

NAD⁺-dependent Sirt6 is a key regulator involved in telomere shortening of in vitro-cultured preimplantation embryos

Parallel comparison of T cell and B cell subpopulations of adenoid hypertrophy and tonsil hypertrophy of children

Biodiversity increases resistance of grasslands against plant invasions under multiple environmental changes

Sulfate formation is dominated by manganese-catalyzed oxidation of SO₂ on aerosol surfaces during haze events

Real-time mass spectrometric characterization of the solid–electrolyte interphase of a lithium-ion battery

Two-way magnetic resonance tuning and enhanced subtraction imaging for non-invasive and quantitative biological imaging

Genome-wide analysis of the interplay between chromatin-associated RNA and 3D genome organization in human cells

Assessment of surface sediment properties and heavy metal contamination in typical urban areas of the Yellow River, China

Analysis of overlapping heterozygous novel submicroscopic CNVs and FANCA–VPS9D1 fusion transcripts in a Fanconi anemia patient

Enhancer reprogramming driven by high-order assemblies of transcription factors promotes phenotypic plasticity and breast cancer endocrine resistance

Ortho-C–H methoxylation of aryl halides enabled by a polarity-reversed N–O reagent

A molecular pathway for CO₂ response in Arabidopsis guard cells

Targeting tumor-intrinsic S100 calcium-binding protein A1 augments antitumor immunity and potentiates immunotherapy efficacy

CREPT/RPRD1B associates with Aurora B to regulate Cyclin B1 expression for accelerating the G2/M transition in gastric cancer

Transfer cells mediate nitrate uptake to control root nodule symbiosis

R406 elicits anti-Warburg effect via Syk-dependent and -independent mechanisms to trigger apoptosis in glioma stem cells

Juxtamembrane 2 mimic peptide competitively inhibits mitochondrial trafficking and activates ROS-mediated apoptosis pathway to exert anti-tumor effects

TRPV1⁺ sensory nerves modulate corneal inflammation after epithelial abrasion via RAMP1 and SSTR5 signaling

Acute tobacco smoke exposure exacerbates the inflammatory response to corneal wounds in mice via the sympathetic nervous system

Antibiotic-induced dysbiosis of gut microbiota impairs corneal development in postnatal mice by affecting CCR2 negative macrophage distribution

The mouse autonomic nervous system modulates inflammation and epithelial renewal after corneal abrasion through the activation of distinct local macrophages

Epothilone B Speeds Corneal Nerve Regrowth and Functional Recovery through Microtubule Stabilization and Increased Nerve Beading

Single-cell RNA sequencing deciphers the mechanism of sepsis-induced liver injury and the therapeutic effects of artesunate

Mast Cells Participate in Corneal Development in Mice

Insulin Restores an Altered Corneal Epithelium Circadian Rhythm in Mice with Streptozotocin-induced Type 1 Diabetes

Spatially defined single-cell transcriptional profiling characterizes diverse chondrocyte subtypes and nucleus pulposus progenitors in human intervertebral discs

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