Abstract
Bardet–Biedl syndrome (BBS) is a genetically heterogeneous autosomal recessive disorder characterized by variable obesity, pigmentary retinopathy, polydactyly, mental retardation, hypogonadism and renal failure. In order to identify novel BBS loci we undertook autozygosity mapping studies using high-density SNP microarrays in consanguineous kindreds. We mapped a BBS locus to a 10.1 Mb region at 12q15–q21.2 in a large Omani BBS family (peak lod score 8.3 at θ=0.0 for marker D12S1722) that contained the recently described BBS10 locus. Mutation analysis of candidate genes within the target interval, including the BBS10 gene, revealed a homozygous frameshift mutation in FLJ23560 and mutations were also detected in four smaller consanguineous families with regions of autozygosity at 12q21.2. These findings (a) confirm a previous report that FLJ23560 (BBS10) mutations are a significant cause of BBS, and (b) further demonstrate the utility of high-density SNP array mapping in consanguineous families for the mapping and identification of recessive disease genes.
Similar content being viewed by others
Log in or create a free account to read this content
Gain free access to this article, as well as selected content from this journal and more on nature.com
or
References
Green JS, Parfrey PS, Harnett JD et al: The cardinal manifestations of Bardet–Biedl syndrome, a form of Lawrence–Moon–Bardet–Biedl syndrome. N Engl J Med 1989; 321: 1002–1009.
Klein D, Ammann F : The syndrome of Laurence–Moon–Bardet–Biedl and allied diseases in Switzerland. Clinical, genetic and epidemiological studies. J Neurol Sci 1969; 9: 479–513.
Beales PL, Warner AM, Hitman GA, Thakker R, Flinter FA : Bardet–Biedl syndrome: a molecular and phenotypic study of 18 families. J Med Genet 1997; 34: 92–98.
Croft JB, Morrell D, Chase CL, Swift M : Obesity in heterozygous carriers of the gene for the Bardet–Biedl syndrome. Am J Med Genet 1995; 55: 12–15.
Farag TI, Teebi AS : High incidence of Bardet–Biedl syndrome among the Bedouin. Clin Genet 1989; 36: 463–464.
Rajab A, Bappal B, Al-Shaikh H, Al-Khusaibi S, Mohammed AJ : Common autosomal recessive diseases in Oman derived from a hospital-based registry. Commun Genet 2005; 8: 27–30.
Kwitek-Black AE, Carmi R, Duyk GM et al: Linkage of Bardet–Biedl syndrome to chromosome 16q and evidence for non-allelic genetic heterogeneity. Nature Genet 1993; 5: 392–396.
Sheffield VC, Carmi R, Kwitek-Black A et al: Identification of a Bardet–Biedl syndrome locus on chromosome 3 and evaluation of an efficient approach to homozygosity mapping. Hum Molec Genet 1994; 3: 1331–1335.
Carmi R, Elbedour K, Stone EM, Sheffield VC : Phenotypic differences among patients with Bardet–Biedl syndrome linked to three different chromosome loci. Am J Med Genet 1995; 59: 199–203.
Young T-L, Penney L, Woods MO et al: A fifth locus for Bardet–Biedl syndrome maps to chromosome 2q31. Am J Hum Genet 1999; 64: 901–904.
Katsanis N, Beales PL, Woods MO et al: Mutations in MKKS cause obesity, retinal dystrophy and renal malformations associated with Bardet–Biedl syndrome. Nat Genet 2000; 26: 67–70.
Slavotinek AM, Stone EM, Mykytyn K et al: Mutations in MKKS cause Bardet–Biedl syndrome. Nat Genet 2000; 26: 15–16.
Mykytyn K, Braun T, Carmi R et al: Identification of the gene that, when mutated, causes the human obesity syndrome BBS4. Nat Genet 2001; 28: 188–191.
Nishimura DY, Searby CC, Carmi R et al: Positional cloning of a novel gene on chromosome 16q causing Bardet–Biedl syndrome (BBS2). Hum Molec Genet 2001; 10: 865–874.
Mykytyn K, Nishimura DY, Searby CC et al: Identification of the gene (BBS1) most commonly involved in Bardet–Biedl syndrome, a complex human obesity syndrome. Nat Genet 2002; 31: 435–438.
Ansley SJ, Badano JL, Blacque OE et al: Basal body dysfunction is a likely cause of pleiotropic Bardet–Biedl syndrome. Nature 2003; 425: 628–633.
Chiang AP, Nishimura D, Searby C et al: Comparative genomic analysis identifies an ADP-ribosylation factor-like gene as the cause of Bardet–Biedl syndrome (BBS3). Am J Hum Genet 2004; 75: 475–484.
Fan Y, Esmail MA, Ansley SJ et al: Mutations in a member of the Ras superfamily of small GTP-binding proteins causes Bardet–Biedl syndrome. Nat Genet 2004; 36: 989–993.
Li JB, Gerdes JM, Haycraft CJ et al: Comparative genomics identifies a flagellar and basal body proteome that includes the BBS5 human disease gene. Cell 2004; 117: 541–552.
Nishimura DY, Swiderski RE, Searby CC et al: Comparative genomics and gene expression analysis identifies BBS9, a new Bardet–Biedl syndrome gene. Am J Hum Genet 2005; 77: 1021–1033.
Stoetzel C, Laurier V, Davis EE et al: BBS10 encodes a vertebrate-specific chaperonin-like protein and is a major BBS locus. Nat Genet, 2 April 2006 (E-pub ahead of print).
Chiang AP, Beck JS, Yen HJ et al: Homozygosity mapping with SNP arrays identifies TRIM32, an E3 ubiquitin ligase, as a Bardet–Biedl syndrome gene (BBS11). Proc Natl Acad Sci USA, 10 April 2006 (E-pub ahead of print).
Gissen P, Johnson CA, Morgan NV et al: Mutations in VPS33B, encoding a regulator of SNARE-dependent membrane fusion, cause arthrogryposis-renal dysfunction-cholestasis (ARC) syndrome. Nat Genet 2004; 36: 400–404.
Forshew T, Johnson CA : SCAMP: a spreadsheet to collate autozygosity mapping projects. J Med Genet 2004; 41: E125.
Katsanis N : The oligogenic properties of Bardet–Biedl syndrome. Hum Mol Genet 2004; 13: R65–R71.
Gherman A, Davis EE, Katsanis N : The ciliary proteome database: an integrated community resource for the genetic and functional dissection of cilia. Nat Genet 2006; 38: 961–962.
Kim JC, Ou YY, Badano JL et al: MKKS/BBS6, a divergent chaperonin-like protein linked to the obesity disorder Bardet–Biedl syndrome, is a novel centrosomal component required for cytokinesis. J Cell Sci 2005; 118: 1007–1020.
Blacque OE, Reardon MJ, Li C et al: Loss of C. elegans BBS-7 and BBS-8 protein function results in cilia defects and compromised intraflagellar transport. Genes Dev 2004; 18: 1630–1642.
Mykytyn K, Sheffield VC : Establishing a connection between cilia and Bardet–Biedl syndrome. Trends Mol Med 2004; 10: 106–109.
Yen HJ, Tayeh MK, Mullins RF, Stone EM, Sheffield VC, Slusarski DC : Bardet–Biedl syndrome genes are important in retrograde intracellular trafficking and Kupffer's vesicle cilia function. Hum Mol Genet 2006; 15: 667–677.
Nishimura DY, Fath M, Mullins RF et al: Bbs2-null mice have neurosensory deficits, a defect in social dominance, and retinopathy associated with mislocalization of rhodopsin. Proc Natl Acad Sci USA 2004; 101: 16588–16593.
Fath MA, Mullins RF, Searby C et al: Mkks-null mice have a phenotype resembling Bardet–Biedl syndrome. Hum Mol Genet 2005; 14: 1109–1118.
Kim JC, Badano JL, Sibold S et al: The Bardet–Biedl protein BBS4 targets cargo to the pericentriolar region and is required for microtubule anchoring and cell cycle progression. Nat Genet 2004; 36: 462–470.
Ross AJ, May-Simera H, Eichers ER et al: Disruption of Bardet–Biedl syndrome ciliary proteins perturbs planar cell polarity in vertebrates. Nat Genet 2005; 37: 1135–1140.
Ditzel L, Lowe J, Stock D et al: Crystal structure of the thermosome, the archaeal chaperonin and homolog of CCT. Cell 1998; 93: 125–138.
Katsanis N, Ansley SJ, Badano JL et al: Triallelic inheritance in Bardet–Biedl syndrome, a Mendelian recessive disorder. Science 2001; 293: 2256–2259.
Beales PL, Badano JL, Ross AJ et al: Genetic interaction of BBS1 mutations with alleles at other BBS loci can result in non-Mendelian Bardet–Biedl syndrome. Am J Hum Genet 2003; 72: 1187–1199.
Woods CG, Cox J, Springell K et al: Quantification of homozygosity in consanguineous individuals with autosomal recessive disease. Am J Hum Genet 2006; 78: 889–896.
Acknowledgements
We thank the many referring clinicians and the families who participated in our research studies. In addition, we thank C Searby and G Beck for technical assistance. We thank the Medical Research Council and the Wellcome Trust for financial support. This work was also supported by National Institutes of Health grant R01-EY11298 (VCS and EMS, the Carver Endowment for Molecular Ophthalmology (EMS and VCS), and Research to Prevent Blindness (Department of Ophthalmology, University of Iowa). VCS and EMS are investigators of the Howard Hughes Medical Institute.
Author information
Authors and Affiliations
Corresponding author
Additional information
Supplementary Information accompanies the paper on European Journal of Human Genetics website (http://www.nature.com/ejhg)
Supplementary information
Rights and permissions
About this article
Cite this article
White, D., Ganesh, A., Nishimura, D. et al. Autozygosity mapping of Bardet–Biedl syndrome to 12q21.2 and confirmation of FLJ23560 as BBS10. Eur J Hum Genet 15, 173–178 (2007). https://doi.org/10.1038/sj.ejhg.5201736
Received:
Revised:
Accepted:
Published:
Issue date:
DOI: https://doi.org/10.1038/sj.ejhg.5201736
Keywords
This article is cited by
-
Genetic characterization and disease mechanism of retinitis pigmentosa; current scenario
3 Biotech (2017)
-
Genetic and clinical characterization of Pakistani families with Bardet-Biedl syndrome extends the genetic and phenotypic spectrum
Scientific Reports (2016)
-
Predicting the number and sizes of IBD regions among family members and evaluating the family size requirement for linkage studies
European Journal of Human Genetics (2008)
-
An autosomal genome-wide screen for celiac disease in Bedouin families
Genes & Immunity (2008)


