Skip to main content

Thank you for visiting nature.com. You are using a browser version with limited support for CSS. To obtain the best experience, we recommend you use a more up to date browser (or turn off compatibility mode in Internet Explorer). In the meantime, to ensure continued support, we are displaying the site without styles and JavaScript.

  • Original Article
  • Published:

Single nucleotide polymorphisms in toll-like receptor 6 are associated with altered lipopeptide- and mycobacteria-induced interleukin-6 secretion

Abstract

Toll-like receptors (TLRs) are critical mediators of the immune response to pathogens. The influence of human TLR6 polymorphisms on susceptibility to infection is only partially understood. Most microbes contain lipopeptides recognized by TLR2/1 or TLR2/6 heterodimers. Our aim was to determine whether single nucleotide polymorphisms in TLR6 are associated with altered immune responses to lipopeptides and whole mycobacteria. We sequenced the TLR6 coding region in 100 healthy South African adults to assess genetic variation and determined associations between polymorphisms and lipopeptide- and mycobacteria-induced interleukin (IL)-6 production in whole blood. We found two polymorphisms, C745T and G1083C, that were associated with altered IL-6 secretion. G1083C was associated with altered IL-6 levels in response to lipopeptides, Mycobacterium tuberculosis lysate (Mtb lysate, P=0.018) and Bacille Calmette-Guerin (BCG P=0.039). The 745T allele was also associated with lower NF-κB signaling in response to di-acylated lipopeptide, PAM2 (P=0.019) or Mtb (P=0.026) in an HEK293 cell line reconstitution assay, compared with the 745C allele. We conclude that TLR6 polymorphisms may be associated with altered lipopeptide-induced cytokine responses and recognition of Mtb. These studies provide new insight into the role of TLR6 variation and the innate immune response to human infection.

This is a preview of subscription content, access via your institution

Access options

Buy this article

USD 39.95

Prices may be subject to local taxes which are calculated during checkout

Figure 1
Figure 2
Figure 3
Figure 4
Figure 5

Similar content being viewed by others

References

  1. van Duin D, Medzhitov R, Shaw AC . Triggering TLR signaling in vaccination. Trends Immunol 2006; 27: 49–55.

    Article  CAS  Google Scholar 

  2. Akira S, Uematsu S, Takeuchi O . Pathogen recognition and innate immunity. Cell 2006; 124: 783–801.

    Article  CAS  Google Scholar 

  3. Beutler B . Microbe sensing, positive feedback loops, and the pathogenesis of inflammatory diseases. Immunol Rev 2009; 227: 248–263.

    Article  CAS  Google Scholar 

  4. Palm NW, Medzhitov R . Pattern recognition receptors and control of adaptive immunity. Immunol Rev 2009; 227: 221–233.

    Article  CAS  Google Scholar 

  5. Hill AV . Aspects of genetic susceptibility to human infectious diseases. Annu Rev Genet 2006; 40: 469–486.

    Article  CAS  Google Scholar 

  6. Misch EA, Hawn TR . Toll-like receptor polymorphisms and susceptibility to human disease. Clin Sci (Lond) 2008; 114: 347–360.

    Article  Google Scholar 

  7. Hill AV . The genomics and genetics of human infectious disease susceptibility. Annu Rev Genomics Hum Genet 2001; 2: 373–400.

    Article  CAS  Google Scholar 

  8. Hawn TR, Misch EA, Dunstan SJ, Thwaites GE, Lan NT, Quy HT et al. A common human TLR1 polymorphism regulates the innate immune response to lipopeptides. Eur J Immunol 2007; 37: 2280–2289.

    Article  CAS  Google Scholar 

  9. Johnson CM, Lyle EA, Omueti KO, Stepensky VA, Yegin O, Alpsoy E et al. Cutting edge: a common polymorphism impairs cell surface trafficking and functional responses of TLR1 but protects against leprosy. J Immunol 2007; 178: 7520–7524.

    Article  CAS  Google Scholar 

  10. Wurfel MM, Gordon AC, Holden TD, Radella F, Strout J, Kajikawa O et al. Toll-like receptor 1 polymorphisms affect innate immune responses and outcomes in sepsis. Am J Respir Crit Care Med 2008; 178: 710–720.

    Article  CAS  Google Scholar 

  11. Omueti KO, Beyer JM, Johnson CM, Lyle EA, Tapping RI . Domain exchange between human toll-like receptors 1 and 6 reveals a region required for lipopeptide discrimination. J Biol Chem 2005; 280: 36616–36625.

    Article  CAS  Google Scholar 

  12. Takeuchi O, Kawai T, Muhlradt PF, Morr M, Radolf JD, Zychlinsky A et al. Discrimination of bacterial lipoproteins by toll-like receptor 6. Int Immunol 2001; 13: 933–940.

    Article  CAS  Google Scholar 

  13. Takeuchi O, Sato S, Horiuchi T, Hoshino K, Takeda K, Dong Z et al. Cutting edge: role of Toll-like receptor 1 in mediating immune response to microbial lipoproteins. J Immunol 2002; 169: 10–14.

    Article  CAS  Google Scholar 

  14. Buwitt-Beckmann U, Heine H, Wiesmuller KH, Jung G, Brock R, Akira S et al. TLR1- and TLR6-independent recognition of bacterial lipopeptides. J Biol Chem 2006; 281: 9049–9057.

    Article  CAS  Google Scholar 

  15. Morr M, Takeuchi O, Akira S, Simon MM, Muhlradt PF . Differential recognition of structural details of bacterial lipopeptides by toll-like receptors. Eur J Immunol 2002; 32: 3337–3347.

    Article  CAS  Google Scholar 

  16. Brightbill HD, Modlin RL . Toll-like receptors: molecular mechanisms of the mammalian immune response. Immunology 2000; 101: 1–10.

    Article  CAS  Google Scholar 

  17. Means TK, Wang S, Lien E, Yoshimura A, Golenbock DT, Fenton MJ . Human toll-like receptors mediate cellular activation by Mycobacterium tuberculosis. J Immunol 1999; 163: 3920–3927.

    CAS  PubMed  Google Scholar 

  18. Underhill DM, Ozinsky A, Smith KD, Aderem A . Toll-like receptor-2 mediates mycobacteria-induced proinflammatory signaling in macrophages. Proc Natl Acad Sci USA 1999; 96: 14459–14463.

    Article  CAS  Google Scholar 

  19. Bulut Y, Faure E, Thomas L, Equils O, Arditi M . Cooperation of Toll-like receptor 2 and 6 for cellular activation by soluble tuberculosis factor and Borrelia burgdorferi outer surface protein A lipoprotein: role of Toll-interacting protein and IL-1 receptor signaling molecules in Toll-like receptor 2 signaling. J Immunol 2001; 167: 987–994.

    Article  CAS  Google Scholar 

  20. Dhiman N, Ovsyannikova IG, Vierkant RA, Ryan JE, Shane Pankratz V, Jacobson RM et al. Associations between SNPs in toll-like receptors and related intracellular signaling molecules and immune responses to measles vaccine: preliminary results. Vaccine 2008; 26: 1731–1736.

    Article  CAS  Google Scholar 

  21. Hoffjan S, Stemmler S, Parwez Q, Petrasch-Parwez E, Arinir U, Rohde G et al. Evaluation of the toll-like receptor 6 Ser249Pro polymorphism in patients with asthma, atopic dermatitis and chronic obstructive pulmonary disease. BMC Med Genet 2005; 6: 34.

    Article  Google Scholar 

  22. Tantisira K, Klimecki WT, Lazarus R, Palmer LJ, Raby BA, Kwiatkowski DJ et al. Toll-like receptor 6 gene (TLR6): single-nucleotide polymorphism frequencies and preliminary association with the diagnosis of asthma. Genes Immun 2004; 5: 343–346.

    Article  CAS  Google Scholar 

  23. Kesh S, Mensah NY, Peterlongo P, Jaffe D, Hsu K, M VDB et al. TLR1 and TLR6 polymorphisms are associated with susceptibility to invasive aspergillosis after allogeneic stem cell transplantation. Ann N Y Acad Sci 2005; 1062: 95–103.

    Article  CAS  Google Scholar 

  24. WHO. Global Tuberculosis Control: Epidemiology, Strategy, Financing. WHO Report 2009. World Health Organisation, Geneva, Switzerland, 2009, (WHO/HTM/TB/2009.411).

  25. Bafica A, Scanga CA, Feng CG, Leifer C, Cheever A, Sher A . TLR9 regulates Th1 responses and cooperates with TLR2 in mediating optimal resistance to Mycobacterium tuberculosis. J Exp Med 2005; 202: 1715–1724.

    Article  CAS  Google Scholar 

  26. Ma X, Liu Y, Gowen BB, Graviss EA, Clark AG, Musser JM . Full-exon resequencing reveals toll-like receptor variants contribute to human susceptibility to tuberculosis disease. PLoS One 2007; 2: e1318.

    Article  Google Scholar 

  27. Lorenz E, Mira JP, Cornish KL, Arbour NC, Schwartz DA . A novel polymorphism in the toll-like receptor 2 gene and its potential association with staphylococcal infection. Infect Immun 2000; 68: 6398–6401.

    Article  CAS  Google Scholar 

  28. Schroder NW, Diterich I, Zinke A, Eckert J, Draing C, von Baehr V et al. Heterozygous Arg753Gln polymorphism of human TLR-2 impairs immune activation by Borrelia burgdorferi and protects from late stage Lyme disease. J Immunol 2005; 175: 2534–2540.

    Article  Google Scholar 

  29. Schroder NW, Hermann C, Hamann L, Gobel UB, Hartung T, Schumann RR . High frequency of polymorphism Arg753Gln of the Toll-like receptor-2 gene detected by a novel allele-specific PCR. J Mol Med 2003; 81: 368–372.

    Article  Google Scholar 

  30. Schroder NW, Schumann RR . Single nucleotide polymorphisms of Toll-like receptors and susceptibility to infectious disease. Lancet Infect Dis 2005; 5: 156–164.

    Article  Google Scholar 

  31. Fishman D, Faulds G, Jeffery R, Mohamed-Ali V, Yudkin JS, Humphries S et al. The effect of novel polymorphisms in the interleukin-6 (IL-6) gene on IL-6 transcription and plasma IL-6 levels, and an association with systemic-onset juvenile chronic arthritis. J Clin Invest 1998; 102: 1369–1376.

    Article  CAS  Google Scholar 

  32. Poltorak A, He X, Smirnova I, Liu MY, Van Huffel C, Du X et al. Defective LPS signaling in C3H/HeJ and C57BL/10ScCr mice: mutations in Tlr4 gene. Science (NY) 1998; 282: 2085–2088.

    Article  CAS  Google Scholar 

  33. Chen G, Gharib TG, Huang CC, Taylor JM, Misek DE, Kardia SL et al. Discordant protein and mRNA expression in lung adenocarcinomas. Mol Cell Proteomics 2002; 1: 304–313.

    Article  CAS  Google Scholar 

  34. Greenbaum D, Colangelo C, Williams K, Gerstein M . Comparing protein abundance and mRNA expression levels on a genomic scale. Genome Biol 2003; 4: 117.

    Article  Google Scholar 

  35. Barreiro LB, Ben-Ali M, Quach H, Laval G, Patin E, Pickrell JK et al. Evolutionary dynamics of human Toll-like receptors and their different contributions to host defense. PLoS Genet 2009; 5: e1000562.

    Article  Google Scholar 

  36. Okusawa T, Fujita M, Nakamura J, Into T, Yasuda M, Yoshimura A et al. Relationship between structures and biological activities of mycoplasmal diacylated lipopeptides and their recognition by toll-like receptors 2 and 6. Infect Immun 2004; 72: 1657–1665.

    Article  CAS  Google Scholar 

  37. Muller SD, Muller MR, Huber M, Esche Uv U, Kirschning CJ, Wagner H et al. Triacyl-lipopentapeptide adjuvants: TLR2-dependent activation of macrophages and modulation of receptor-mediated cell activation by altering acyl-moieties. Int Immunopharmacol 2004; 4: 1287–1300.

    Article  CAS  Google Scholar 

  38. Rwan M, Grau T, Tschumi A, Sander P . Lipoprotein synthesis in mycobacteria. Microbiology 2007; 153: 652–658.

    Article  Google Scholar 

  39. Pecora ND, Gehring AJ, Canaday DH, Boom WH, Harding CV . Mycobacterium tuberculosis LprA is A lipoprotein agonist of TLR2 that regulates innate immunity and APC function. J Immunol 2006; 177: 422–429.

    Article  CAS  Google Scholar 

  40. Henneke P, Dramsi S, Mancuso G, Chraibi K, Pellegrini E, Theilacker C et al. Lipoproteins are critical TLR2 activating toxins in group B streptococcal sepsis. J Immunol 2008; 180: 6149–6158.

    Article  CAS  Google Scholar 

  41. West TE, Ernst RK, Jansson-Hutson MJ, Skerrett SJ . Activation of Toll-like receptors by Burkholderia pseudomallei. BMC Immunol 2008; 9: 46.

    Article  Google Scholar 

  42. Lombard Z, Brune AE, Hoal EG, Babb C, Van Helden PD, Epplen JT et al. HLA class II disease associations in Southern Africa. Tissue Antigens 2006; 67: 97–110.

    Article  CAS  Google Scholar 

  43. Gordon D . Viewing and editing assembled sequences using Consed. In: Baxevanis AD et al. (eds). Current Protocols in Bioinformatics, John Wiley & Sons, Inc., chapter 11, unit 11. 2. 2003.

    Google Scholar 

  44. Gordon D, Abajian C, Green P . Consed: a graphical tool for sequence finishing. Genome Res 1998; 8: 195–202.

    Article  CAS  Google Scholar 

  45. Bochud PY, Hawn TR, Aderem A . Cutting edge: a Toll-like receptor 2 polymorphism that is associated with lepromatous leprosy is unable to mediate mycobacterial signaling. J Immunol 2003; 170: 3451–3454.

    Article  CAS  Google Scholar 

  46. Storm N, Darnhofer-Patel B, van den Boom D, Rodi CP . MALDI-TOF mass spectrometry-based SNP genotyping. Methods Mol Biol 2003; 212: 241–262.

    CAS  PubMed  Google Scholar 

  47. Olomolaiye O, Wood NA, Bidwell JL . A novel NlaIII polymorphism in the human IL-6 promoter. Eur J Immunogenet 1998; 25: 267.

    CAS  PubMed  Google Scholar 

Download references

Acknowledgements

We thank the adult volunteers who participated in the study and also the immunology team at the SATVI research site in Worcester for obtaining informed consent and collecting blood from the participants. We also thank the National Bioinformatics Node (NBN) at the University of Cape Town for providing the PhredPhrap/Consed software. We also thank Rick Wells for excellent technical assistance and Marta Janer and Sarah Li for genotyping work. This work was supported by the Dana Foundation (TRH and WAH), NIH NO1-AI-70022 (TRH and WAH) and the Burroughs Wellcome Foundation (TRH).

Author information

Authors and Affiliations

Corresponding author

Correspondence to W A Hanekom.

Ethics declarations

Competing interests

The authors declare no conflict of interest.

Additional information

Supplementary Information accompanies the paper on Genes and Immunity website

Supplementary information

Rights and permissions

Reprints and permissions

About this article

Cite this article

Shey, M., Randhawa, A., Bowmaker, M. et al. Single nucleotide polymorphisms in toll-like receptor 6 are associated with altered lipopeptide- and mycobacteria-induced interleukin-6 secretion. Genes Immun 11, 561–572 (2010). https://doi.org/10.1038/gene.2010.14

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Published:

  • Issue date:

  • DOI: https://doi.org/10.1038/gene.2010.14

Keywords

This article is cited by

Search

Quick links