Table 2 Number of accumulated SNPs and mutation rates in the J166output strains.

From: A mutation burst during the acute phase of Helicobacter pylori infection in humans and rhesus macaques

Strains

Sampling time post infection

Mutation

Infection time

Adjusted mutation*

  

Number

Rate

From

To

Number

Rate

1wkA

1 week

12

3.8 × 10−4

Inoculation

1 week

12

3.8 × 10−4

1wkB

1 week

8

2.5 × 10−4

Inoculation

1 week

8

2.5 × 10−4

1wkC

1 week

7

2.2 × 10−4

Inoculation

1 week

7

2.2 × 10−4

1moA

1 month

14

1.0 × 10−4

1 week

1 month

6

6.3 × 10−5

1moB

1 month

11

8.1 × 10−5

1 week

1 month

3

3.2 × 10−5

1moC

1 month

15

1.1 × 10−4

1 week

1 month

7

7.4 × 10−5

2moA

2 months

16

5.9 × 10−5

1 month

2 months

2

1.5 × 10−5

2moB

2 months

18

6.6 × 10−5

1 month

2 months

4

2.9 × 10−5

2moC

2 months

17

6.3 × 10−5

1 month

2 months

3

2.2 × 10−5

6moA

6 months

22

2.7 × 10−5

2 months

6 months

5

9.2 × 10−6

6moB

6 months

20

2.5 × 10−5

2 months

6 months

3

5.5 × 10−6

6moC

6 months

21

2.6 × 10−5

2 months

6 months

4

7.4 × 10−6

  1. SNP, single-nucleotide polymorphism.
  2. *Based on the number of mutations that accumulated in addition to the median number of mutations at the previous sampling point.
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