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The role of the human microbiome in prostate cancer: a systematic review from diagnosis to treatment

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Abstract

Background

Prostate cancer (PC) heterogeneity and treatment resistance remain major clinical challenges, with emerging evidence implicating the microbiome as a key modulator of disease pathogenesis. While microbial dysbiosis has been linked to PC diagnosis, progression, and therapeutic outcomes, the mechanisms underlying these associations are poorly understood. This review synthesizes current evidence on the diagnostic, prognostic, and therapeutic potential of the microbiome in PC.

Methods

A systematic search of PubMed, Embase, and Cochrane Central Register of Controlled Trials (through April 2024) was conducted following PRISMA guidelines (PROSPERO: CRD42024534899). Controlled and observational studies investigating microbial roles in PC diagnosis (e.g., ISUP grading group), prognosis, or treatment response were included. Data extraction and quality assessment used the QUIPS tool. From 810 screened records, 42 studies met inclusion criteria.

Results

Distinct microbial profiles differentiated PC from controls, with Mycoplasma genitalium and Staphylococcus spp. enriched in prostate tumors (3.1- and 2.7-fold, respectively) and correlated with inflammation (IL-6: r = 0.38, p = 0.002). Urinary microbiota showed diagnostic potential (sensitivity: 58–82%), though sampling methods influenced variability. Prognostically, Betaproteobacteria gut enrichment predicted earlier castration-resistant progression (5.2 months; HR 1.8, 95% CI 1.3–2.5), while ADT-induced dysbiosis (e.g., Klebsiella overgrowth) accelerated resistance (2.1-fold risk). Therapies altered microbial ecology: radiotherapy depleted Bacteroides (linked to proctitis; OR 3.1), and immunotherapy responders harbored higher Akkermansia muciniphila. Microbial androgen synthesis and endotoxin production emerged as resistance mechanisms.

Conclusions

The microbiome influences PC detection, aggressiveness, and treatment efficacy through direct (tissue-resident) and indirect (gut-derived) mechanisms. Standardized profiling and microbiome-modulating strategies (e.g., probiotics during ADT) may personalize management. Prospective trials are needed to validate causality and translate microbial biomarkers into clinical practice.

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Fig. 1: PRISMA 2020 flow diagram.
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References

  1. Vaccarella S, Li M, Bray F, Kvale R, Serraino D, Lorenzoni V, et al. Prostate cancer incidence and mortality in Europe and implications for screening activities: population based study. BMJ. 2024;386:e077738. https://doi.org/10.1136/bmj-2023-077738.

    Article  PubMed  PubMed Central  Google Scholar 

  2. Hsing AW, Chokkalingam AP. Prostate cancer epidemiology. Front Biosci. 2006;11:1388–413. https://doi.org/10.2741/1891.

    Article  CAS  PubMed  Google Scholar 

  3. Rebello RJ, Oing C, Knudsen KE, Loeb S, Johnson DC, Reiter RE, et al. Prostate cancer. Nat Rev Dis Prim. 2021;7:1–27. https://doi.org/10.1038/s41572-020-00243-0.

    Article  Google Scholar 

  4. Watson PA, Arora VK, Sawyers CL. Emerging mechanisms of resistance to androgen receptor inhibitors in prostate cancer. Nat Rev Cancer. 2015;15:701–11. https://doi.org/10.1038/NRC4016.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  5. Schwabe RF, Jobin C. The microbiome and cancer. Nat Rev Cancer. 2013;13:800–12. https://doi.org/10.1038/NRC3610.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Gopalakrishnan V, Spencer CN, Nezi L, Reuben A, Andrews MC, Karpinets TV, et al. Gut microbiome modulates response to anti-PD-1 immunotherapy in melanoma patients. Science. 2018;359:97–103. https://doi.org/10.1126/SCIENCE.AAN4236.

    Article  CAS  PubMed  Google Scholar 

  7. De Marzo AM, Platz EA, Sutcliffe S, Xu J, Grönberg H, Drake CG, et al. Inflammation in prostate carcinogenesis. Nat Rev Cancer. 2007;7:256–69. https://doi.org/10.1038/NRC2090.

    Article  PubMed  PubMed Central  Google Scholar 

  8. Tucci M, Bertaglia V, Vignani F, Buttigliero C, Fiori C, Porpiglia F, et al. Addition of docetaxel to androgen deprivation therapy for patients with hormone-sensitive metastatic prostate cancer: a systematic review and meta-analysis. Eur Urol. 2016;69:563–73. https://doi.org/10.1016/J.EURURO.2015.09.013.

    Article  CAS  PubMed  Google Scholar 

  9. Pernigoni N, Zagato E, Calcinotto A, Troiani M, Mestre RP, Calì B, et al. Commensal bacteria promote endocrine resistance in prostate cancer through androgen biosynthesis. Science. 2021;374:216–24. https://doi.org/10.1126/SCIENCE.ABF8403/SUPPL_FILE/SCIENCE.ABF8403_SM.PDF.

    Article  CAS  PubMed  Google Scholar 

  10. Plottel CS, Blaser MJ. Microbiome and malignancy. Cell Host Microbe. 2011;10:324–35. https://doi.org/10.1016/J.CHOM.2011.10.003.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  11. Wang I, Song L, Wang BY, Kalebasty AR, Uchio E, Zi X. Prostate cancer immunotherapy: a review of recent advancements with novel treatment methods and efficacy. Am J Clin Exp Urol. 2022;10:210.

    PubMed  PubMed Central  Google Scholar 

  12. Zitvogel L, Ma Y, Raoult D, Kroemer G, Gajewski TF. The microbiome in cancer immunotherapy: diagnostic tools and therapeutic strategies. Science. 2018;359:1366–70. https://doi.org/10.1126/SCIENCE.AAR6918.

    Article  CAS  PubMed  Google Scholar 

  13. Liu Q, Yang Y, Pan M, Yang F, Yu Y, Qian Z. Role of the gut microbiota in tumorigenesis and treatment. Theranostics. 2024;14:2304. https://doi.org/10.7150/THNO.91700.

    Article  PubMed  PubMed Central  Google Scholar 

  14. Gilbert JA, Blaser MJ, Caporaso JG, Jansson JK, Lynch SV, Knight R. Current understanding of the human microbiome. Nature Med. 2018;24:392–400. https://doi.org/10.1038/nm.4517.

    Article  CAS  PubMed  Google Scholar 

  15. Knoll T, Omar MI, Maclennan S, Hernández V, Canfield S, Yuan Y, et al. Key steps in conducting systematic reviews for underpinning clinical practice guidelines: methodology of the European association of urology. Eur Urol. 2018;73:290–300. https://doi.org/10.1016/J.EURURO.2017.08.016.

    Article  PubMed  Google Scholar 

  16. Miyake M, Ohnishi K, Hori S, Nakano A, Nakano R, Yano H, et al. Mycoplasma genitalium Infection and chronic inflammation in human prostate cancer: detection using prostatectomy and needle biopsy specimens. Cells. 2019;8. https://doi.org/10.3390/cells8030212.

  17. Cavarretta I, Ferrarese R, Cazzaniga W, Saita D, Lucianò R, Ceresola ER, et al. The microbiome of the prostate tumor microenvironment. Eur Urol. 2017;72:625–31. https://doi.org/10.1016/j.eururo.2017.03.029.

    Article  CAS  PubMed  Google Scholar 

  18. Ahn HK, Kim K, Park J, Kim KH. Urinary microbiome profile in men with genitourinary malignancies. Investig Clin Urol. 2022;63:569–76. https://doi.org/10.4111/icu.20220124.

    Article  PubMed  PubMed Central  Google Scholar 

  19. Gonçalves MFM, Pina-Vaz T, Fernandes ÂR, Miranda IM, Silva CM, Rodrigues AG, et al. Microbiota of urine, glans and prostate biopsies in patients with prostate cancer reveals a dysbiosis in the genitourinary system. Cancers. 2023;15. https://doi.org/10.3390/cancers15051423.

  20. Lee J, Wickes BL, Fu J, Brockman NE, Garg H, Jobin C, et al. Prevalence of genotoxic bacteria in men undergoing biopsy for prostate cancer. Prostate. 2023;83:663–9. https://doi.org/10.1002/pros.24500.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  21. Kalinen S, Kallonen T, Gunell M, Ettala O, Jambor I, Knaapila J, et al. Differences in gut microbiota profiles and microbiota steroid hormone biosynthesis in men with and without prostate cancer. Eur Urol Open Sci. 2024;62:140–50. https://doi.org/10.1016/j.euros.2024.02.004.

    Article  PubMed  PubMed Central  Google Scholar 

  22. Liu X, Dong Q. Associations between gut microbiota and three prostate diseases: a bidirectional two-sample Mendelian randomization study. Sci Rep. 2024;14. https://doi.org/10.1038/S41598-024-54293-5.

  23. Feng Y, Jaratlerdsiri W, Patrick SM, Lyons RJ, Haynes AM, Collins CC, et al. Metagenomic analysis reveals a rich bacterial content in high-risk prostate tumors from African men. Prostate. 2019;79:1731–8. https://doi.org/10.1002/PROS.23897.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  24. Salachan PV, Rasmussen M, Fredsøe J, Ulhøi B, Borre M, Sørensen KD. Microbiota of the prostate tumor environment investigated by whole-transcriptome profiling. Genome Med. 2022;14:9. https://doi.org/10.1186/s13073-022-01011-3.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  25. Liu Y, Jiang H. Compositional differences of gut microbiome in matched hormone-sensitive and castration-resistant prostate cancer. Transl Androl Urol. 2020;9:1937–44. https://doi.org/10.21037/tau-20-566.

    Article  PubMed  PubMed Central  Google Scholar 

  26. Terrisse S, Goubet AG, Ueda K, Thomas AM, Quiniou V, Thelemaque C, et al. Immune system and intestinal microbiota determine efficacy of androgen deprivation therapy against prostate cancer. J Immunother Cancer. 2022;10. https://doi.org/10.1136/JITC-2021-004191.

  27. Kim JH, Seo H, Kim S, Ul-Haq A, Rahim MA, Jo S, et al. Biochemical recurrence in prostate cancer is associated with the composition of lactobacillus: microbiome analysis of prostatic tissue. Int J Mol Sci. 2023;24. https://doi.org/10.3390/ijms241310423.

  28. Gioscio E, Rancati T, Avuzzi B, De Cecco L, Morlino S, Noris Chiorda B, et al. Modulations of gut microbiota following radiotherapy for prostate cancer. Radiother Oncol. 2020;152:S60–1. https://doi.org/10.1016/S0167-8140(21)00146-8.

    Article  Google Scholar 

  29. Wang L. Changes in the gut microbial profile during long-term androgen deprivation therapy for prostate cancer. Prostate Cancer Prostatic Dis. 2023. https://doi.org/10.1038/s41391-023-00723-w.

  30. Frugé AD, Ptacek T, Tsuruta Y, Morrow CD, Azrad M, Desmond RA, et al. Dietary changes impact the gut microbe composition in overweight and obese men with prostate cancer undergoing radical prostatectomy. J Acad Nutr Diet. 2018;118:714–23.e1. https://doi.org/10.1016/j.jand.2016.10.017.

    Article  PubMed  Google Scholar 

  31. Gilbert SM, Kuo Yfang, Shahinian VB. Prevalent and incident use of androgen deprivation therapy among men with prostate cancer in the United States. Urol Oncol. 2009;29:647. https://doi.org/10.1016/J.UROLONC.2009.09.004.

    Article  PubMed  PubMed Central  Google Scholar 

  32. Kure A, Tsukimi T, Ishii C, Aw W, Obana N, Nakato G, et al. Gut environment changes due to androgen deprivation therapy in patients with prostate cancer. Prostate Cancer Prostatic Dis. 2023;26:323–30. https://doi.org/10.1038/s41391-022-00536-3.

    Article  CAS  PubMed  Google Scholar 

  33. Li JKM, Wang LL, Wong CYP, Chiu PKF, Teoh JYC, Kwok HSW, et al. A cross-sectional study on gut microbiota in prostate cancer patients with prostatectomy or androgen deprivation therapy. Prostate Cancer Prostatic Dis. 2021;24:1063–72. https://doi.org/10.1038/s41391-021-00360-1.

    Article  CAS  PubMed  Google Scholar 

  34. Routy B, Le Chatelier E, Derosa L, Duong CPM, Alou MT, Daillère R, et al. Gut microbiome influences efficacy of PD-1-based immunotherapy against epithelial tumors. Science. 2018;359:91–7. https://doi.org/10.1126/SCIENCE.AAN3706.

    Article  CAS  PubMed  Google Scholar 

  35. Maślak E, Miśta W, Złoch M, Błońska D, Pomastowski P, Monedeiro F, et al. A new approach to imaging and rapid microbiome identification for prostate cancer patients undergoing radiotherapy. Biomedicines. 2022;10. https://doi.org/10.3390/biomedicines10081806.

  36. Peiffer LB, White JR, Jones CB, Slottke RE, Ernst SE, Moran AE, et al. Composition of gastrointestinal microbiota in association with treatment response in individuals with metastatic castrate resistant prostate cancer progressing on enzalutamide and initiating treatment with anti-PD-1 (pembrolizumab). Neoplasia. 2022;32:100822. https://doi.org/10.1016/j.neo.2022.100822.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  37. Sfanos KS, Markowski MC, Peiffer LB, Ernst SE, White JR, Pienta KJ, et al. Compositional differences in gastrointestinal microbiota in prostate cancer patients treated with androgen axis-targeted therapies. Prostate Cancer Prostatic Dis. 2018;21:539–48. https://doi.org/10.1038/s41391-018-0061-x.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  38. Liss M, Shah D, Leach R, Rourke E, Basler J, White J. Intestinal microbiome analysis identifies bacteria and biosynthesis pathways associated with prostate cancer. J Urol. 2018;199:e1112.

    Article  Google Scholar 

  39. Wang L, Zheng YB, Yin S, Li KP, Wang JH, Bao EH, et al. Causal relationship between gut microbiota and prostate cancer contributes to the gut-prostate axis: insights from a Mendelian randomization study. Discov. Oncol. 2024;15. https://doi.org/10.1007/S12672-024-00925-1.

  40. O’Toole PW, Jeffery IB. Gut microbiota and aging. Science. 2015;350:1214–5. https://doi.org/10.1126/SCIENCE.AAC8469.

    Article  PubMed  Google Scholar 

  41. Fransen F, van Beek AA, Borghuis T, Aidy SE, Hugenholtz F, van der Gaast-de Jongh C, Savelkoul HFJ. Aged gut microbiota contributes to systemical inflammaging after transfer to germ-free mice. Front Immunol. 2017;8:293898 https://doi.org/10.3389/FIMMU.2017.01385/BIBTEX.

    Article  Google Scholar 

  42. Thevaranjan N, Puchta A, Schulz C, Naidoo A, Szamosi JC, Verschoor CP, et al. Age-associated microbial dysbiosis promotes intestinal permeability, systemic inflammation, and macrophage dysfunction. Cell Host Microbe. 2017;21:455–66.e4. https://doi.org/10.1016/J.CHOM.2017.03.002.

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  43. Rivera-Izquierdo M, de Rojas JP, Martínez-Ruiz V, Pérez-Gómez B, Sánchez MJ, Khan KS, et al. Obesity as a risk factor for prostate cancer mortality: a systematic review and dose-response meta-analysis of 280,199 patients. Cancers. 2021;13. https://doi.org/10.3390/CANCERS13164169.

  44. Mingdong W, Xiang G, Yongjun Q, Mingshuai W, Hao P. Causal associations between gut microbiota and urological tumors: a two-sample mendelian randomization study. BMC Cancer. 2023;23. https://doi.org/10.1186/s12885-023-11383-3.

  45. Xie Q, Hu B. Effects of gut microbiota on prostatic cancer: a two-sample Mendelian randomization study. Front Microbiol. 2023;14. https://doi.org/10.3389/fmicb.2023.1250369.

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Authors and Affiliations

Authors

Contributions

AD and DG performed the systematic review, extracted and analyzed the data, and drafted the manuscript. Both authors contributed equally as first authors. MCM conceived and designed the study, supervised the project, provided critical revisions, and approved the final version of the manuscript. JPA, FQF, and CC contributed to the writing and critical revision of the manuscript. LL provided expertise on microbiota, and contributed to the interpretation of the findings.

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Correspondence to Maria Carmen Mir.

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Distante, A., Garino, D., Cerrato, C. et al. The role of the human microbiome in prostate cancer: a systematic review from diagnosis to treatment. Prostate Cancer Prostatic Dis (2025). https://doi.org/10.1038/s41391-025-01028-w

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