Fig. 7: Molecular dynamic simulation of CNBD in the presence of MtCaM.
From: Structural basis for the activity regulation of Medicago calcium channel CNGC15
a RMSD of MtCNGC15b after least square fit to backbone throughout the last 500 ns of three repeated simulations. b Calculated titration curve of E533 in MtCNGC15b with or without CaM binding. Predicted pKa’s are indicated. c Three residues with the highest hydrogen bonding occupancy with R553 in each chain throughout the last 500 ns of three repeated simulations in the absence or presence of CaM. d Distribution of solvent accessible surface area of R553 with or without MtCaM binding to MtCNGC15b throughout the last 500 ns of three repeated simulations. e Local environment of Arg553.
