Table 1 Representative EXAFS fits for mono-Zn(II)-GOB-18, mono-Zn(II)-Sfh-I and bi-Zn(II)-BcII

From: A general reaction mechanism for carbapenem hydrolysis by mononuclear and binuclear metallo-β-lactamases

Reaction mixture

Predominant species*

Model

Zn−O

Zn−N

Zn−S

Zn−C CO2−

Zn−His

Zn−Zn

Mono-Zn(II)-GOB-18 resting; Fit Zn-219

E

4N (2 His)

2.01 (7.4)

2.01 (7.4)

  

3.16 (20)

 
       

3.36 (4.6)

 
       

3.73 (16)

 
       

4.44 (22)

 

Mono-Zn(II)-GOB-18 10 ms; Fit S.4a-1

ES

5 N/O

2.07 (6.4)

2.07 (6.4)

    

Mono-Zn(II)-GOB-18 hydrolysed imipenem; Fit S.4b-1

EP

5 N/O

2.08 (9.2)

2.08 (9.2)

    

Mono-Zn(II)-Sfh-I resting; Fit S.11a-3

E

3 N/O (1 His) + 1S

2.02 (4.8)

2.02 (4.8)

2.29 (3.5)

 

2.82 (11)

 
       

3.19 (0.1)

 
       

4.11 (17)

 
       

4.47 (12)

 

Mono-Zn(II)-Sfh-I 10 ms; Fit S.11b-3

ES

3 N/O (1 His) + 1S

2.02 (2.3)

2.02 (2.3)

2.29 (3.0)

 

2.84 (11)

 
       

3.61 (0.1)

 
       

4.26 (2.1)

 
       

4.37 (1.1)

 

Mono-Zn(II)-Sfh-I hydrolysed imipenem; Fit S.11c-3

EP

3 N/O (1 His) + 1S

2.02 (3.1)

2.02 (3.1)

2.29 (4.3)

 

2.82 (6.8)

 
       

3.17 (0.1)

 
       

4.08 (14)

 
       

4.47 (14)

 

Bi-Zn(II)-BcII resting38

E

4 N/O (2 His) + 0.5S + Zn–Zn

2.03 (6.3)

2.03 (6.3)

2.27 (2.6)

 

2.90 (3.1)

3.42 (8.3)

       

3.18 (5.8)

 
       

4.08 (11)

 
       

4.43 (15)

 

Bi-Zn(II)-BcII 10 ms; Fit S.18a-6

EI

2N (2 His) + 2.5O + 0.5S + Zn–Zn

1.97 (3.2)

1.97 (3.2)

2.3 (3.3)

 

2.91 (4.9)

3.82 (5.3)

   

2.13 (6.2)

2.13 (6.2)

  

3.13 (1.2)

 
       

4.20 (13)

 
       

4.43 (16)

 

Bi-Zn(II)-BcII hydrolysed imipenem; Fit S.18b-5

EP

4 N/O (2 His) + 0.5S + 0.5C + Zn–Zn

2.02 (6.0)

2.30 (6.0)

2.30 (7.3)

 

2.94 (3.3)

3.51 (8.1)

       

3.13 (0.9)

 
       

4.17 (14)

 
       

4.44 (21)

 
  1. *The indicated predominant species is based on simulations using the models and parameters from the kinetic studies