Table 3 MicroRNA-convergent fusions involving precursors of upregulated miRNAs
From: Frequent miRNA-convergent fusion gene events in breast cancer
miRNA | Number 5′ partner genes | Number tumors with more than one 5′ partner | Number tumors 3′ fusion | Host gene | Cytogenetic location |
|---|---|---|---|---|---|
hsa-mir-21 | 20 | 2 | 19 | VMP1 | 17q23.1 |
hsa-mir-25, hsa-mir-93, hsa-mir-106b | 12 | 1 | 14 | MCM7 | 7q22.1 |
hsa-mir-26a-1 | 3 | 0 | 3 | CTDSPL | 3p22.2 |
hsa-mir-26b | 3 | 0 | 3 | CTDSP1 | 2q35 |
hsa-mir-33b, hsa-mir-6777 | 62 | 19 | 82 | SREBF1 | 17p11.2 |
hsa-mir-151a | 11 | 2 | 11 | PTK2 | 8q24.3 |
hsa-mir-340 | 4 | 0 | 4 | RNF130 | 5q15 |
hsa-mir-342 | 38 | 11 | 34 | EVL | 14q32.2 |
hsa-mir-483 | 107 | 17 | 49 | IGF2 | 11p15.5 |
hsa-mir-548ah, hsa-mir-4450 | 6 | 0 | 6 | SHROOM3 | 4q21.1 |
hsa-mir-548ao | 5 | 0 | 5 | SFRP1 | 8p11.21 |
hsa-mir-629 | 8 | 0 | 14 | TLE3 | 15q23 |
hsa-mir-641 | 2 | 0 | 2 | AKT2 | 19q13.2 |
hsa-mir-675 | 5 | 1 | 6 | H19 | 11p15.5 |
hsa-mir-1229 | 4 | 1 | 3 | MGAT4B | 5q35.3 |
hsa-mir-1249 | 6 | 2 | 29 | KIAA0930 | 22q13.31 |
hsa-mir-1343 | 2 | 0 | 2 | PDHX | 11p13 |
hsa-mir-3145 | 5 | 0 | 5 | NHSL1 | 6q23.3 |
hsa-mir-3194 | 4 | 0 | 4 | NFATC2 | 20q13.2 |
hsa-mir-3616 | 5 | 0 | 5 | EYA2 | 20q13.12 |
hsa-mir-3909 | 3 | 0 | 3 | TOM1 | 22q12.3 |
hsa-mir-4714 | 103 | 6 | 29 | IGF1R | 15q26.3 |
hsa-mir-4728 | 338 | 92 | 155 | ERBB2 | 17q12 |
hsa-mir-4802 | 5 | 0 | 5 | RBM47 | 4p14 |
hsa-mir-6510 | 22 | 5 | 24 | KRT15 | 17q21.2 |
