Table 1 The biological process gene ontologies analyzed in this study
From: Tree co-occurrence and transcriptomic response to drought
Gene ontology—biological process | Description | Mean standardized effect size of the mean pairwise distance | D | p-value |
|---|---|---|---|---|
GO:0009414 | Response to water deprivation | −1.36 | 1.28 | 0.771 |
GO:0009753 | Response to jasmonic acid | −1.21 | 0.79 | 0.28 |
GO:0006979 | Response to oxidative stress | −1.20 | 1.20 | 0.689 |
GO:0010200 | Response to chitin | −1.17 | 1.10 | 0.574 |
GO:0009611 | Response to wounding | −1.04 | 0.90 | 0.355 |
GO:0006629 | Lipid metabolic process | −0.97 | 1.55 | 0.952 |
GO:0006855 | Drug transmembrane transport | −0.97 | 0.85 | 0.306 |
GO:0016132 | Brassinosteroid biosynthetic process | −0.93 | 1.58 | 0.951 |
GO:0000186 | Activation of MAPKK activity | −0.91 | 1.29 | 0.758 |
GO:0006865 | Amino-acid transport | −0.90 | 1.28 | 0.769 |
GO:0009737 | Response to abscisic acid | −0.86 | 1.92 | 0.841 |
GO:0010363 | Regulation of plant-type hypersensitive response | −0.78 | 1.49 | 0.941 |
GO:0006869 | Lipid transport | −0.78 | 0.52 | 0.128 |
GO:0010075 | Regulation of meristem growth | −0.76 | 0.75 | 0.268 |
GO:0006508 | Proteolysis | −0.74 | 1.61 | 0.903 |
GO:0010103 | Stomatal complex morphogenesis | −0.72 | 1.47 | 0.813 |
GO:0009750 | Response to fructose | −0.72 | 1.23 | 0.669 |
GO:0015979 | Photosynthesis | −0.69 | 1.69 | 0.942 |
GO:0006098 | Pentose-phosphate shunt | −0.67 | 1.82 | 0.977 |
GO:0009744 | Response to sucrose | −0.63 | 1.16 | 0.498 |
GO:0009860 | Pollen tube growth | −0.62 | 1.48 | 0.72 |
GO:0015996 | Chlorophyll catabolic process | −0.61 | 0.15 | 0.173 |
GO:0006633 | Fatty acid biosynthetic process | −0.61 | 0.13 | 0.164 |
GO:0006598 | Polyamine catabolic process | −0.60 | −1.69 | 0.011 |
GO:0010025 | Wax biosynthetic process | −0.60 | 2.16 | 0.876 |
GO:0006457 | Protein folding | −0.58 | 1.82 | 0.805 |
GO:0009269 | Response to desiccation | −0.55 | 1.73 | 0.804 |
GO:0009624 | Response to nematode | −0.52 | 0.48 | 0.124 |
GO:0009987 | Cellular process | −0.42 | 3.55 | 0.551 |
GO:0009615 | Response to virus | −0.42 | 6.22 | 0.819 |
GO:0000226 | Microtubule cytoskeleton organization | −0.41 | 4.46 | 0.795 |
GO:0009944 | Polarity specification of adaxial/abaxial axis | −0.41 | −6.44 | <0.001 |
GO:0006816 | Calcium ion transport | −0.41 | 4.00 | 0.606 |
GO:0009627 | Systemic acquired resistance | −0.40 | 4.48 | 0.814 |
GO:0009058 | Biosynthetic process | −0.40 | 7.22 | 0.908 |
GO:0006811 | Ion transport | −0.39 | 5.46 | 0.766 |
GO:0019684 | Photosynthesis, light reaction | −0.39 | 4.03 | 0.546 |
GO:0006099 | Tricarboxylic acid cycle | −0.38 | 1.38 | 0.442 |
GO:0006810 | Transport | −0.37 | 7.84 | 0.911 |
GO:0016556 | mRNA modification | −0.37 | 6.56 | 0.914 |
GO:0006470 | Protein dephosphorylation | −0.37 | 1.33 | 0.437 |
GO:0006412 | Translation | −0.21 | 1.10 | 0.575 |
GO:0006857 | Oligopeptide transport | −0.09 | 1.45 | 0.891 |
GO:0009409 | Response to cold | 0.00 | 1.60 | 0.971 |
GO:0006073 | Cellular glucan metabolic process | 0.00 | 1.22 | 0.71 |
GO:0008152 | Metabolic process | 0.33 | 1.51 | 0.705 |
GO:0016310 | Phosphorylation | 0.37 | 0.86 | 0.326 |
GO:0006950 | Response to stress | 0.42 | −0.10 | 0.006 |
GO:0008272 | Sulfate transport | 0.43 | 0.94 | 0.385 |
GO:0009607 | Response to biotic stimulus | 0.49 | 0.73 | 0.253 |
GO:0009664 | Plant-type cell wall organization | 0.52 | 1.34 | 0.831 |
GO:0006351 | Transcription, DNA-templated | 0.73 | −1.13 | 0.278 |
GO:0019252 | Starch biosynthetic process | 0.77 | −1.37 | 0.278 |
GO:0005975 | Carbohydrate metabolic process | 0.83 | 0.06 | 0.015 |
GO:0006468 | Protein phosphorylation | 0.96 | −0.44 | <0.001 |
GO:0006952 | Defense response | 1.02 | 1.22 | 0.724 |
GO:0006355 | Regulation of transcription, DNA-templated | 1.04 | 1.05 | 0.508 |
GO:0006200 | ATP catabolic process | 1.44 | 1.04 | 0.462 |
GO:0015706 | Nitrate transport | 3.17 | −5.04 | 0.265 |
