Fig. 1 | Nature Communications

Fig. 1

From: Characterizing steroid hormone receptor chromatin binding landscapes in male and female breast cancer

Fig. 1The alternative text for this image may have been generated using AI.

Study schematic and steroid hormone receptor binding in male breast cancer. a A graphic visualization of the study design. The male silhouette was from Wikipedia (https://en.wikipedia.org/wiki/File:Male_Bathroom_Symbol.png). The female silhouette was from Wikipedia (https://commons.wikimedia.org/wiki/File:Toilet_women.svg), from a collection commissioned by the United States Department of Transportation, designed by AIGA http://www.aiga.org/content.cfm/symbolsigns, and converted into SVG by Wikipedia-user Lateiner. The image is used under a CC-BY 2.5 license. b Genome browser snapshot, depicting two known ERα bound regions with read counts for 2 random samples chosen for each factor. Genomic coordinates and read counts are indicated above. c Heatmaps depicting peak intensity in primary tumors for 30 ERα (blue), 7 FOXA1 (light green), 10 AR (red), 7 GR (black), 4 PR (purple), and 3 GATA3 (dark green) binding events (±5 kb from the peak center (triangle)). 5079 ERα sites were determined using the consensus ERα binding sites identified in at least 50% of patients (15 out of 30 samples). d Pie charts depicting genomic distributions for the consensus binding sites of each of the factors: AR (shared in 5 out of 10 samples), FOXA1 (3 out of 7 samples), PR (2 out of 4 samples), GR (3 out of 7 samples), and GATA3 (1 out of 3 samples). e Negative Z-score of the top 5 sequence motifs for binding sites of each factor depicted as a barplot. Colored (non-gray) bar represents the target factor’s sequence motif

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