Table 1 The methylation marks associated with breast cancer
From: Heritable DNA methylation marks associated with susceptibility to breast cancer
CpG site | Δl | P-value for association with breast cancer | Chromosome | Position (hg19) | UCSC reference gene |
|---|---|---|---|---|---|
cg06536614 | 143.6285 | 7.23 × 10−09 | 5 | 135416381 | VTRNA2-1 (MIR886) |
cg10306192 | 109.4419 | 3.46 × 10−05 | 11 | 102576374 | MMP27 |
cg18110333 | 108.7894 | 4.13 × 10−10 | 6 | 292329 | DUSP22 |
cg00124993 | 107.9848 | 1.71 × 10−08 | 5 | 135416412 | VTRNA2-1 (MIR886) |
cg26328633 | 107.4759 | 1.64 × 10−08 | 5 | 135416394 | VTRNA2-1 (MIR886) |
cg25340688 | 105.9031 | 2.73 × 10−08 | 5 | 135416398 | VTRNA2-1 (MIR886) |
cg18514595 | 95.25137 | 1.67 × 10−07 | 22 | 49579968 | unannotated |
cg26896946 | 92.07959 | 1.50 × 10−09 | 5 | 135416405 | VTRNA2-1 (MIR886) |
cg11035303 | 90.90393 | 1.74 × 10−10 | 3 | 43465503 | ANO10 |
cg23012654 | 89.75858 | 3.85 × 10−05 | 14 | 97493395 | unannotated |
cg26773954 | 88.76923 | 1.12 × 10−06 | 13 | 111969980 | unannotated |
cg22901919 | 87.59356 | 1.85 × 10−06 | 4 | 141317067 | CLGN |
cg04417708 | 85.02877 | 1.28 × 10−08 | 17 | 4043867 | ZZEF1 |
cg18584561 | 85.00000 | 9.30 × 10−06 | 2 | 11682017 | GREB1 |
cg11608150 | 82.61516 | 5.21 × 10−07 | 5 | 135415948 | unannotated |
cg01741999 | 81.77624 | 3.28 × 10−09 | 2 | 219137824 | PNKD |
cg01074083 | 80.41676 | 1.58 × 10−05 | 16 | 17516862 | XYLT1 |
cg02096220 | 80.35092 | 3.64 × 10−07 | 4 | 129212177 | unannotated |
cg03916490 | 79.70945 | 2.07 × 10−08 | 7 | 1080558 | C7orf50 |
cg27639199 | 79.52796 | 5.37 × 10−06 | 15 | 81666528 | TMC3 |
cg25188166 | 79.40458 | 4.90 × 10−08 | 3 | 119420208 | unannotated |
cg05865327 | 78.94414 | 1.65 × 10−06 | 14 | 102274741 | PPP2R5C |
cg23947138 | 77.34483 | 7.47 × 10−10 | 13 | 114782778 | RASA3 |
cg05187003 | 77.22616 | 1.50 × 10−08 | 21 | 34641507 | IL10RB |
