Table 1 | Ub-VPS-labeling sites identified in HEK 293T cell lysate
From: Reactive-site-centric chemoproteomics identifies a distinct class of deubiquitinase enzymes
Class | Protein | Labeling sites | Class | Protein | Labeling sites |
|---|---|---|---|---|---|
USP | UBP1 | C90 | Other | 1433T | C134 |
UBP3 | C168 | A6NLJ7 | C9 | ||
UBP5 | C219*, C335, C471* | ADRM1 | C357 | ||
UBP7 | C90*, C121*, C223, C315* | ALDOA | C339 | ||
UBP8 | C786, C809* | AUP1 | C391 | ||
USP9X | C1566 | BOLA2 | C31 | ||
UBP10 | C424, C436*, C697* | CATB | C319 | ||
UBP12 | C48 | CH60 | C442 | ||
UBP13 | C345 | CLIC4 | C35 | ||
UBP14 | C105*, C114, C122*, C203*, C257*, C359*, C415* | DCAF7 | C256 | ||
UBP15 | C289*, C298 | DDX55 | C437 | ||
UBP16 | C205 | DFFA | C165 | ||
UBP19 | C506 | EF1A1 | C411 | ||
UBP21 | C221 | EF2 | C41 | ||
UBP22 | C171*, C185 | EIF3I | C76 | ||
UBP24 | C1698 | FETUA | C132 | ||
UBP25 | C178 | HECD1 | C2579 | ||
UBP27 | C87, C91* | IF5A1 | C22, C73 | ||
UBP28 | C171 | IMDH2 | C331 | ||
UBP30 | C77 | KLH28 | C189 | ||
UBP33 | C194 | KPYM | C423, C424 | ||
UBP34 | C1903 | LDH6A | C163 | ||
UBP35 | C450 | LDHA | C35 | ||
UBP36 | C131 | LDHB | C36, C294 | ||
UBP37 | C350 | MIF | C60, C81 | ||
UBP38 | C454 | NDK8 | C94 | ||
UBP40 | C50 | PAIRB | C11 | ||
UBP42 | C120 | PAL4A | C62 | ||
UBP45 | C199 | PCBP1 | C54 | ||
UBP47 | C197 | PPIA | C115 | ||
UBP54 | C42 | PROF1 | C128 | ||
OTU | OTU1 | C160 | Q5HYB6 | C154 | |
OTU6B | C158, C172* | RCC2 | C428 | ||
OTU7A | C210 | RHOA | C16 | ||
OTUB1 | C91 | RL10L | C105 | ||
OTUB2 | C51 | RL12 | C141 | ||
OTUD3 | C76 | RL14 | C42 | ||
OTUD4 | C45 | RL23 | C28 | ||
OTUD5 | C224 | RL9 | C134 | ||
ZRAN1 | C443 | RS20 | C70 | ||
UCH | BAP1 | C91, C103* | RS27L | C77 | |
UCHL1 | C47*, C90, C152*, C220* | RS28 | C27 | ||
UCHL3 | C50*, C95 | RS3 | C134 | ||
UCHL5 | C9*, C88, C100* | RS6 | C12 | ||
JOS | ATX3 | C14, C18* | RSSA | C148 | |
JOS1 | C36 | SAP | C409, C476 | ||
JOS2 | C24 | SENP8 | C163 †| ||
| Â | Â | Â | SERA | C369 | |
SPEE | C71 | ||||
SQSTM | C113 | ||||
TBA1A | C25, C129, C295, C347, C376 | ||||
TBA1B | C347 | ||||
TBB2A | C12, C239, C303, C354 | ||||
TBB4A | C127 | ||||
TBC15 | C24 | ||||
TEBP | C40 | ||||
THIO | C32, C35, C73 | ||||
UBE3C | C1051 †| ||||
ZNFX1 | C1860 | ||||
ZUFSP | C360 |
