Table 1 Bayesian Network Model Parameters
Normalized value | Type | Range | |
|---|---|---|---|
PWM score (f i ) | (Fimo_Score i -10)/10 | Continuous | (0, 1) |
Distance to TSS (d i ) | 1/(1+TSS_dist i /1000) | Continuous | (0, 1) |
Conservation (c i ) | PhastCon Score in placenta | Continuous | (0, 1) |
TF binding (b i ) | Hidden | Binary | 0, 1 |
DNase I tag (n i ) | DNase-seq read # in 200 bp upstream or downstream from the motif | Continuous | (0, +) |
