Fig. 1
From: An imputation platform to enhance integration of rice genetic resources
Oryza sativa diversity panels used in this study. Geographical distribution of the country of origin for the 3KRG (3000 Rice Genomes Project; n = 3023) and HDRA (High-Density Rice Array; n = 1568) panels. Pie charts depict subpopulation composition of each panel; ind1, ind2 and ind3 = geographically differentiated groups within indica; adx = admixed within Varietal Group; Black pie segments = admixed across Indica-Japonica. Boxplots show distributions of per-sample homozygosity in the 3KRG and HDRA panels (medians at 99.5% and 98.5%, respectively). Boxplot features: thick line = median; box edges = 25th and 75th quantiles; whiskers = lowest and highest observed values within 1.5 interquartile range from 25th and 75th quantiles, respectively
