Fig. 4 | Nature Communications

Fig. 4

From: UPF1-like helicase grip on nucleic acids dictates processivity

Fig. 4

Mechanistic model describing helicase grip in different energy states. a Schematic representation of the three observable helicase states (see text). Gray circle represents NA. Colored clips represent helicases clamping NA more or less tightly. b Binding and sliding times plot versus increasing binding energy differences represented with a logarithmic scale in y. For each helicase i, the sliding time τS, the unwinding time τU and the falling time τR are drawn in logarithmic scale against the binding energy difference ΔEbi1=Ebi − Eb1 measured in units of kBT (Eb1 corresponds to UPF1AKS→HPA binding energy). Each helicase has its three representative points located at the same abscissa. Full lines are exponentials predicted by Supplementary Equation 3 (Supplementary Note). Distance between the lines reflects the energy difference between these three states. Error bars indicate standard deviation

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