Fig. 3
Comparative genomic analysis of hexaploid sweetpotato and two wild relatives. a Percentages of the mapped and unmapped 10× Genomics linked reads of hexaploid sweetpotato cultivar “Tanzania” to the I. trifida and I. triloba genome assemblies. b Percentages of 10× Genomics reads with better alignments when mapped to one genome assembly compared to the other. c Comparison of the hexaploid sweetpotato molecules with the two diploid assemblies. The outermost circle displays ideograms of the pseudochromosomes of the genome assemblies (in Mb scales). The I. trifida genome is on the left and the I. triloba genome is on the right. The second circle displays the normalized depth of coverage by 10× Genomics reads (1 Mb window). The third circle displays the average read depth of coverage of regions specifically homologous to I. trifida or I. triloba genomes (1 Mb window). The fourth circle displays the total length of specific regions (1 Mb window size). The fifth circle displays the percentage of the homologous sequences shared among the hexaploid genome and the two diploid genomes (1 Mb window size). The innermost circle displays homologies among the hexaploid and two diploid genomes
