Fig. 7 | Nature Communications

Fig. 7

From: A structural mechanism for directing corepressor-selective inverse agonism of PPARγ

Fig. 7

Coregulator binding preferences of the unique and mutual T0070907-bound conformations. a Snapshot overlay of 2D [1H,15N]-TROSY-HSQC spectra of T0070907-bound 15N-labeled PPARγ LBD titrated with NCoR1 peptide. b Extracted 1D planes of the NCoR1 spectra shown in a show the qualitative binding trends observed by NMR, whereas c an overlay of the extracted 1D planes is quantitatively described by d spectra using a 4-state model where the two slowly exchanging receptor populations (R and R*) are capable of binding to the peptide (RP and R*P), and receptor isomerizes in both the free and peptide-bound states (R ↔ R*, and RP ↔ R*P). (eh) Analysis of performed for T0070907-bound 15N-labeled PPARγ LBD titrated with TRAP220 peptide performed similarly to the NCoR1 analysis described in ad, which is also quantitatively described using the same 4-state model

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