Table 2 MC1R variants

From: Genome-wide study of hair colour in UK Biobank explains most of the SNP heritability

Variant

A1

Consequence

MAF

OR (initial)

Classification

rs3212379*

T

Upstream

0.010

5.28

Strong-R

rs1805005

T

V60L

0.121

0.32

Weak-r

rs34474212

C

S83P

7×10−5

5.06

Strong-R

rs1805006

A

D84E

0.009

2.97

Strong-R

rs2228479

A

V92M

0.099

0.11

Weak-r

rs34158934

T

T95M

3×10−4

5.52

Strong-R

rs11547464

A

R142H

0.007

4.17

Strong-R

rs1805007

T

R151C

0.105

10.98

Strong-R

rs201326893

A

Y152X

2×10−4

8.12

Strong-R

rs1110400

C

I155T

0.009

1.14

Weak-r

rs1805008

T

R160W

0.091

4.16

Strong-R

rs885479

A

R163Q

0.040

0.16

Weak-r

rs555179612

TC

I182Hfs

0.002

8.75

Strong-R

rs200000734*

T

R213W

6×10−4

2.07

Strong-R

rs1805009

C

D294H

0.022

5.21

Strong-R

rs368507952*

A

R306H

3×10−4

7.42

Strong-R

  1. MC1R variants with MAF (UK10K), the initial GWAS odds ratio (before conditioning) and the classification in strong and weak alleles according to the Penetrance Matrix. The three newly identified red-hair alleles are marked with an asterisk (*)