Table 1 Results of ITC experiments titrating the ATD dimer with various ligands
From: Structural elements of a pH-sensitive inhibitor binding site in NMDA receptors
Ligand | Ifenprodil (GluN1a–GluN2B) | Ifenprodil (GluN1b–GluN2B) | 93-4 | 93-5 | 93-6 | 93-115 | 93-31 | 93-88 | 93-97 |
|---|---|---|---|---|---|---|---|---|---|
N-substituent volume (Å3) | (n/a) | (n/a) | 0.97 | 33.74 | 50.54 | 50.33 | 67.35 | 67.35 | 67.13 |
n pH 7.6 | 1.0 ± 0.01 | 0.98 ± 0.01 | 0.98 ± 0.02 | 1.00 ± 0.01 | 1.0 ± 0.01 | 1.0 ± 0.01 | 0.95 ± 0.01 | 0.99 ± 0.02 | 1.0 ± 0.02 |
n pH 6.5 | 0.97 ± 0.01 | – | 0.98 ± 0.01 | 0.98 ± 0.01 | 1.0 ± 0.01 | 1.0 ± 0.01 | 1.0 ± 0.01 | 1.00 ± 0.02 | 0.99 ± 0.02 |
KDpH 7.6 (nM) | 226 ± 15 | 255 ± 11 | 147 ± 5.0 | 66.3 ± 3.2 | 129 ± 9.3 | 175 ± 5.6 | 121 ± 5.1 | 331 ± 29 | 305 ± 18 |
KDpH 6.5 (nM) | 249 ± 16 | – | 170 ± 4.8 | 70.7 ± 2.0 | 116 ± 2.2 | 186 ± 11 | 78 ± 3.0 | 171 ± 6.6 | 147 ± 5.6 |
ΔHpH 7.6 (kcal mol−1) | −1.53 × 104 ± 346 | −1.48 × 104 ± 265 | −2.37 × 104 ± 457 | −2.28 × 104 ± 834 | −1.94 × 104 ± 809 | −2.38 × 104 ± 708 | −2.16 × 104 ± 944 | −2.79 × 104 ± 765 | −2.12 × 104 ± 568 |
ΔHpH 6.5 (kcal mol−1) | −1.70 × 104 ± 982 | – | −2.24 × 104 ± 483 | −2.11 × 104 ± 1140 | −1.96 × 104 ± 146 | −2.09 × 104 ± 568 | −2.22 × 104 ± 807 | −2.03 × 104 ± 1430 | −1.75 × 104 ± 941 |
TΔSpH 7.6 (kcal mol−1) | −6.10 × 103 ± 308 | −5.64 × 104 ± 264 | −1.42 × 103 ± 447 | −1.28 × 104 ± 866 | −9.87 × 103 ± 804 | −1.41 × 104 ± 536 | −1.19 × 104 ± 914 | −1.89 × 104 ± 804 | −1.22 × 104 ± 544 |
TΔSpH 6.5 (kcal mol−1) | −7.84 × 103 ± 960 | – | −1.30 × 103 ± 500 | −1.12 × 104 ± 1140 | −9.92 × 103 ± 132 | −1.16 × 104 ± 604 | −1.23 × 104 ± 811 | −1.09 × 104 ± 1440 | −8.00 × 103 ± 919 |
pH-boost | 0.91 ± 0.066 | – | 0.86 ± 0.030 | 0.94 ± 0.047 | 1.11 ± 0.081 | 0.94 ± 0.034 | 1.55 ± 0.067 | 1.93 ± 0.168 | 2.08 ± 0.125 |