Fig. 7
From: Precise segmentation of densely interweaving neuron clusters using G-Cut
Validation of G-Cut, NeuroGPS-tree and TREES toolbox on a large number of neurons. a The raw Golgi-cox staining image stack. Data size: 8192 × 2048 × 46 voxels. b Forty-five neurons were manually reconstructed using neuTube software and used as ground truth. c Neuron clusters were reconstructed from the image stack by automatic tracing methods in NeuronStudio software. The neuron clusters contained 169 spurious links in total. d–f The neuron clusters in c were segmented by G-Cut, NeuroGPS-tree and TREES tool box into 45 individual neurons, respectively. Identical post-processing was applied to results from all three algorithms to fix tracing errors and prune redundant branches (see Supplementary Fig. 7 and Supplementary Note 2). g Miss-Extra-Scores of the forty-five neurons segmented by G-Cut, NeuroGPS-Tree, and TREES toolbox. Source data are provided as a Source Data file
