Fig. 7
From: Lobular architecture of human adipose tissue defines the niche and fate of progenitor cells

VS progenitors exhibit distinct differentiation potentials. RNAseq analysis was performed on paired progenitor subsets isolated from VS and SCAT of five donors. a Sparse partial least-square discrimant analysis plot of the two principal components. The 95% confidence ellipses are shown to strengthen the cell population clustering (left) and heatmap (right) of the top 400 most differentially expressed genes defining a progenitor subset-specific profile. Color code is set up according to gene expression (high expression in red, low in blue). b Venn diagrams of differentially expressed genes (fold change ≥ 2 from a raw P-value) between VS progenitor subsets: −/− cells vs. −/CD271+, and MSCA1+ (left), −/CD271+ cells vs. −/−, and MSCA1+ (middle) and MSCA1+ cells vs. −/− and −/CD271+ (right), highlighting some genes of interest. c Gene expression levels of BMP7 and CD24 in progenitor subsets isolated from SC and VSAT determined from RNAseq analyses. The results are expressed as log2 gene expression, n = 5 independent donors. Two-way ANOVA followed by Sidak’s multiple comparison test, *P < 0.05, **P < 0.01, ***P < 0.001. d Sorted VS progenitor subsets were cultured in the presence or absence of 5 ng/mL of TGFβ1 for 4 days and immunostaining approaches were performed using phalloidin (F-ACTIN, green), αSMA antibody (red), and DAPI (blue) or cultured under adipogenic condition and stained with Bodipy (green) and DAPI (blue). Representative fluorescence microscopy images are shown. Scale bars: 50 µm. e Gene expression levels of COL1A1, COL3A1, COL6A2, ELN, and GLI1 in VSAT −/− and –/CD271+ progenitor subsets treated or not with TGFβ1 were determined by RT-qPCR analyses. The results are expressed as means ± s.e.m. of experiments performed on n = 3 independent donors. One-way ANOVA followed by Sidak’s multiple comparison test, *P < 0.05, **P < 0.01, ***P < 0.001. f Quantification of lipid accumulation in VS progenitor subsets at day 10, results are means ± s.e.m. of experiments performed on n = 4 independent donors. One-way ANOVA followed by Tukey’s multiple comparison test, *P < 0.05