Fig. 1
From: Extensive intraspecific gene order and gene structural variations in upland cotton cultivars
Comparison of the assembled genomes with their diploid progenitors genomes. a Whole genome comparison among the TM-1 At subgenome, the G. arboreum genome (A2), and the ZM24 At subgenome. b Whole genome comparison among the TM-1 Dt subgenome, G. raimondii genome (D5) and the ZM24 Dt subgenome. c, d TM-1 Hi-C data mapped to TM-1 A06 and G. arboreum Chr06. The dotted boxes indicate the inversions between A06 and Chr06. e Genome comparison of TM-1 A06 and G. arboreum Chr06. The double arrow dash line indicated the same inversions between the Hi-C map and Chromosomes. Source data of (a, b) are provided in a Source Data file
