Table 1 Global statistical comparison of TM-1 and ZM24 genomes
From: Extensive intraspecific gene order and gene structural variations in upland cotton cultivars
Category | TM-1 genome | ZM24 genome | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|
Numbers | N50 (Kb) | Longest (Mb) | Size (Mb) | Percentage of assembly | Numbers | N50 (Kb) | Longest (Mb) | Size (Mb) | Percentage of assembly | |
Contigs | 1283 | 4760 | 23 | 2286 | 100 | 3718 | 1976 | 14 | 2309 | 100 |
Anchored and oriented | 699 | 4856 | 23 | 2226 | 97.4 | 1497 | 2151 | 14 | 2150 | 93.2 |
Gene annotated | 73,624 | Â | Â | 228 | 10.0 | 73,707 | Â | Â | 243 | 10.5 |
Repeat sequence | NAa | NA | NA | 1686 | 73.7 | NA | NA | NA | 1665 | 72.1 |
