Table 2 Summary of the methyltransferases from M. thermoacetica
From: Genome-wide systematic identification of methyltransferase recognition and modification patterns
Gene name ATCC 39073-HH | Gene name ATCC 39073 | Gene product | Predicted specificity | Motif detected | Mean mod. QV | Coverage |
|---|---|---|---|---|---|---|
Type I | ||||||
MothHH_01798 MothHH_01799 | Moth_1671 Moth_1672 | DNA met. Specificity N-6 DNA methylase | N.A. | WGA(m6A)*GNNNNAGATNNNNC | 55.40 53.80 | 1643.71 |
GNNBNA(m6A)*TCTNNNWNTC | ||||||
Type II | ||||||
MothHH_00029 | Moth_0026 | DNA adenine methylase | GASTC | GA(m6A)WTC | 49.58 | 50.29 |
MothHH_00692 | Moth_0639 | DNA methylase N-4/N-6 | N.A. | BGNSTSC(U.K.)NNGNNNRNR | 35.40 | 224.54 |
MothHH_00927 | Moth_0871 | conserved hypothetical protein | N.A. | CA(m6A)TC | 88.75 | 95.23 |
MothHH_01869 | Moth_1737 | DNA adenine methylase | GGATC | GA(m6A)TC | 53.14 | 60.88 |
MothHH_02421 | Moth_2238 | hypothetical protein | N.A. | N.D. | N.D. | 6388 |
MothHH_02424 | Moth_2241 | hypothetical protein | N.A. | N.D | N.D. | 1531 |
MothHH_02467 | Moth_2281 | Adenine-specific DNA methylase | AGGCCT | GGGCC(m4C)C | 151.5 | 343.27 |
Type III | ||||||
MothHH_01297 | Moth_1213 | Site specific subunit | N.A. | AACCA(m6A) | 69.93 | 83.43 |
Neg-control | bgaB (beta-galatosidase) | None | N.D. | N.D. | 116 | |
