Fig. 5 | Nature Communications

Fig. 5

From: TRIM66 reads unmodified H3R2K4 and H3K56ac to respond to DNA damage in embryonic stem cells

Fig. 5The alternative text for this image may have been generated using AI.

Depletion of Trim66 results in the retention of the level of H3K56ac following DNA damage. a Immunoblot analysis of H3K56ac in shTrim66 tet-on ESCs as described in Fig. 3c. b Representative immunofluorescence images (left) and quantification (right) of H3K56ac in WT and TRIM66-KO ESCs at different time points after treatment with etoposide (EPI, 10 μM for 30 min). Scale bar, 10 μm. More than 100 cells are examined in each sample. c Immunoblot analysis of cell fractionation in TRIM66-KO ESCs overexpressed with HA-tagged WT TRIM66 at different time points after treatment with EPI. d Representative immunofluorescence images of H3K56ac and γ-H2AX foci in WT and TRIM66-KO ESCs, and the intensity profile of both H3K56ac and γ-H2AX across the white line as shown in the images. Scale bar, 10 μm. e Quantification of the colocalized H3K56ac and γ-H2AX foci in WT and TRIM66-KO ESCs. More than 100 cells are examined in each sample. f, g Representative immunofluorescence images and quantification of colocalized Rad51/CtIP and γ-H2AX foci in WT and TRIM66-KO ESCs at 1 h after treatment with EPI. Scale bar, 10 μm. Arrowheads indicates colocalized foci. More than 100 cells are examined in each sample. h Immunoblot analysis of the H3K56ac in WT, TRIM66-KO ESCs, and the TRIM66-KO ESCs overexpressed control plasmid, HA-tagged WT TRIM66, the N1123A or D986A mutant of TRIM66. i Quantification of colocalized H3K56ac and γ-H2AX foci in ESCs described in h. More than 200 cells are examined in each sample. j Quantification of the colocalized Rad51/CtIP and γ-H2AX foci in ESCs described in h at 1 h after treatment with EPI. More than 100 cells are examined in each sample. *represents a difference from WT ESCs, #indicates a difference from TRIM66-KO + Ctrl. Data are presented as the means ± SEM. Statistical significance is determined by two-tailed Student’s t-test. *#p < 0.05, **p < 0.01, ***###p < 0.001, N.S., no significance. Source data are provided as a Source Data file

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