Fig. 1
From: Characterization of antibiotic resistance genes in the species of the rumen microbiota

Antibiotic-resistance distribution in ruminal microbes. The 16S rRNA gene sequences used to construct the tree were obtained from the Hungate1000 collection and aligned using RDP Aligner. The phylogenetic tree was generated with the Maximum-Likelihood method using FastTree (1000 replicates), and visualized and annotated using iTOL. Black circles outside the tree represent the genomes, in which ARGs were identified from at least two bioinformatics tools applied in this study