Fig. 4: Performance of LinkedSV on the simulated WES data set. | Nature Communications

Fig. 4: Performance of LinkedSV on the simulated WES data set.

From: LinkedSV for detection of mosaic structural variants from linked-read exome and genome sequencing data

Fig. 4

a Recalls, precisions and F1 scores of six linked-read SV callers on the simulated WES data set. b Heat map showing a deletion that was missed by NAIBR. The overlapping barcodes between the two breakpoints can be clearly visualized (in the black circles). The heat map was plotted by the Loupe software. Dots represent overlapping barcodes. c Supporting fragments of the deletion detected by LinkedSV. Horizontal lines represent linked reads with the same barcode; dots represent reads; colors indicate barcodes. Predicted breakpoint positions are marked by vertical gray lines. Capture regions were shown as vertical bars in the bottom. Source data is provided as a Source Data file.

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