Table 1 Variants associated with heart failure at genome-wide significance.

From: Genome-wide association and Mendelian randomisation analysis provide insights into the pathogenesis of heart failure

rsID

Chr

Position (hg19)

Nearest gene(s)a

Function

Risk/ref allele

RAF (%)

OR (95% CI)

P value

I2HET

PHET

rs660240

1

109817838

CELSR2

UTR3

C/T

0.79

1.06 (1.04–1.08)

3.25E-10

0

0.513

rs17042102

4

111668626

PITX2, FAM241A

Intergenic

A/G

0.12

1.12 (1.09–1.14)

5.71E-20

43.1

0.008

rs11745324

5

137012171

KLHL3

Intronic

G/A

0.77

1.05 (1.03–1.07)

2.35E-08

5.7

0.381

rs4135240

6

36647680

CDKN1A

Intronic

T/C

0.66

1.05 (1.03–1.07)

6.84E-09

43.8

0.009

rs55730499

6

161005610

LPA

Intronic

T/C

0.07

1.11 (1.08–1.14)

1.83E-11

21.1

0.164

rs140570886

6

161013013

LPA

Intronic

C/T

0.02

1.24 (1.16–1.3)

7.69E-11

24.8

0.133

rs1556516

9

22100176

9p21/CDKN2B-AS1

ncRNA

C/G

0.48

1.06 (1.05–1.08)

1.57E-15

12.8

0.269

rs600038

9

136151806

ABO, SURF1

Intergenic

C/T

0.21

1.06 (1.04–1.08)

3.68E-09

0

0.729

rs4746140

10

75417249

SYNPO2L, AGAP5

Intergenic

G/C

0.85

1.07 (1.05–1.09)

1.10E-09

9.7

0.319

rs17617337

10

121426884

BAG3

Intronic

C/T

0.78

1.06 (1.04–1.08)

3.65E-09

55

2.1E-4

rs4766578

12

111904371

ATXN2

Intronic

T/A

0.47

1.04 (1.03–1.06)

4.90E-08

10.6

0.308

rs56094641

16

53806453

FTO

Intronic

G/A

0.42

1.05 (1.03–1.06)

1.21E-08

17.4

0.215

  1. The table shows the 12 independent variants associated with HF at the genome-wide significance level (P < 5 × 10−8) in the meta-analysis of 29 studies. Meta-analyses were carried out using an IVW fixed-effect approach. The I2HET describes the percentage of variation across the 29 studies that is due to heterogeneity. PHET was derived from a Cochran’s Q-test (two-sided) for heterogeneity
  2. Chr, chromosome; ncRNA, non-coding RNA; ref, reference; RAF, risk allele frequency; OR, odds ratio; CI, confidence intervals; HET, heterogeneity; I2, I-squared
  3. aNearest gene with a functional protein or RNA (e.g., anti-sense RNA) product that either overlaps with the sentinel variant, or for intergenic variants, the nearest genes up- and downstream, respectively (separated by comma)