Fig. 3: The mGMB defines the core- and pan-microbiota of mouse gut microbiota.
From: The Mouse Gut Microbial Biobank expands the coverage of cultured bacteria
a The mGMB coverage of the core- and pan-genera of the ob/ob mice. b, The mGMB coverage of the core- and pan-genera of the diverse-background mice. The bar chart shows the frequency of occurrence (FO) of each genus in the analyzed samples (definition: FO = 100% is defined when a genus is present in all samples, while FO = 0 is defined when a genus is present in none of the samples), n = 274 in (a), n = 93 in (b); the box-and-whiskers plot shows the relative abundance (RA) of each taxon, center line: median, bounds of box: quartile, whiskers: Tukey extreme. The RA is exhibited in the percentage value logarithm. Core-genera: genera with FO > 80% and an average RA > 0.1% (log 10 (RA) > −3); pan-genera: genera with FO > 5%. The cutoff values for core- and pan-genera are marked with vertical dashed lines in the panel; purple/blue: genera covered by the mGMB; cream: genera not covered by the mGMB; purple triangle markers: core-genera for both the ob/ob and diverse-background mice12. The n numbers represent the biologically independent samples. Source data are provided as a Source Data file.
