Fig. 4: Cellular deconvolution of 28 GTEx tissues. | Nature Communications

Fig. 4: Cellular deconvolution of 28 GTEx tissues.

From: Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants

Fig. 4

a UMAP using the expression of all scRNA-seq-derived signature genes across the 28 GTEx tissues. b Stacked bar plots showing the fraction of cell types estimated in GTEx RNA-seq samples from mouse scRNA-seq. A colorblind-friendly version of this figure is shown in Supplementary Fig. 5. c Bar plots comparing the number of cell types discovered in mouse scRNA-seq (light gray) vs. the number of these cell types that were estimable for each GTEx tissue. d Box plots showing per RNA-seq sample the distribution of the log2 average square distance from the mean estimated cellular compositions for each GTEx tissue. The thick, black line indicates the median and the dashed lines indicate the bounds of the upper and lower whiskers.

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