Fig. 5: Boxplot of normalized copy number of autosomal genes with Vst > 0.3. | Nature Communications

Fig. 5: Boxplot of normalized copy number of autosomal genes with Vst > 0.3.

From: Haplotype-resolved genomes provide insights into structural variation and gene content in Angus and Brahman cattle

Fig. 5: Boxplot of normalized copy number of autosomal genes with Vst > 0.3.The alternative text for this image may have been generated using AI.

Only those CNV genes with average copy number difference of at least 1.5 copies between the taurine and indicine groups are shown. Dot plots of individual values are overlaid on top of boxplots to show minima and maxima as circles. The bounds of box show the 25th and 75th percentile, with the median drawn as a thick line between these two quartiles. The reference genomes were a UOA_Angus_1, b ARS-UCD1.2, and c UOA_Brahman_1. d Liftover of CNV regions from Brahman and Angus to Hereford ARS-UCD1.2 common coordinate for an assessment of intersection between them at base-pair resolution.

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