Table 1 Explanation and summary of simulation parameters.

From: Mutualist and pathogen traits interact to affect plant community structure in a spatially explicit model

Parameter

Equation

Range

Fig. 2 value

Definition

sf

1

[0, 1]

sm = 0.35

Host affinity of mutualists (f = m) and pathogens (f = p).

   

sp = 0.03

 

γf

2a

[0.1, 0.5]

γm = 0.21

Fecundity of microbes, represented as a proportion of microbes in any given cell that are dispersed as propagules.

   

γp = 0.15

 

bf

2b

[2, 3]

bt = 2.40

Exponent of power-law distribution. This indicates the dispersal limitation of both microbial guilds (f = m, f = p), or plants (f = t).

   

bm = 2.82

 
   

bp = 2.50

 

g

4

[5, 15]

8.80

The impact of microbes on host survival.

h

 

[0.2, 1.5]

0.40

Relative contribution of the mutualist community to seedling recruitment probability.

ζ

 

[0.8]

0.8

Relative fitness of the least fit plant species. The fitness values of plant species (i.e. ζj where j is the plant species), are evenly distributed between ζ and 1.

cf

5

[0.5, 2]

cm = 0.78

Exponent that scales the competitive ability of a microbe according to its effect on host survival.

   

cp = 1.47

 

qf

 

[−0.5, 2]

qm = 0.91

Exponent that scales intrinsic growth rate of microbes with host affinity.

   

qp = 1.64

 

rf

 

[0.1, 2]

rm = 1.31

Intrinsic growth rate of mutualists and pathogens.

   

rp = 1.64

 

αf

 

[0.5, 1.5]

αm = 1.30

Competition coefficients of mutualists and pathogens.

   

αp = 1.00

 
  1. Parameter ranges represent the total range over which parameters were allowed to vary between runs. Values represent the values identified by a random forest model as most likely to drive a positive correlation between host abundance and feedback (i.e. those used in simulation runs depicted in Fig. 2). See Supplementary Table 1 for expanded parameter descriptions.