Fig. 1: Summary of the dataset of complete bacterial plasmids.
From: Large-scale network analysis captures biological features of bacterial plasmids
a The distribution of host phylum represented in the plasmid dataset. b Functional annotation of plasmid-borne genes. The pie chart shows the proportion of unique CDSs with hypothetical function as predicted by Prokka48, and CDSs (genes) with known/unknown biological function based on GO annotation. The bar chart provides the most common biological functions associated with plasmid-borne genes also considering the respective frequency of these genes on plasmid genomes. c The percentage of plasmids covered by the three classification methods: replicon and MOB-typing schemes, and clique assignment. d The distribution of pairwise plasmid similarities (Jaccard index).
