Table 3 Plasmids carrying NDM genes in K. pneumoniae ST147 representative isolates.

From: Integrating whole-genome sequencing within the National Antimicrobial Resistance Surveillance Program in the Philippines

Plasmid

Size (bp)

Replicons

AMR genes

Match accession (size)

Accession

p14ARS_CVM0040-2

110,787

IncFII(Yp)

blaNDM-1, rmtC, sul1

MG462729.1 (110,787 bp)

LR697128

p13ARS_GMH0099

273,158

IncA/C2, IncR, IncFIA(HI1)

blaNDM-1, blaCTX-M-15, blaOXA-1, blaOXA-10, blaTEM-1B, aph(3’)-VI, aph(3′)-Ia, aadA1(x2), aac(6′)-Ib-cr, aph(6)-Id, strA, strB, qnrS1, mph(A), erm(42), ere(A), floR, cmlA1(x2), arr-2 (x2), sul1(x3), sul2, dfrA14

NA

LR697099

p13ARS_VSM0593-1

181,414

IncA/C2

blaNDM-1, aph(3′)-Ia, mph(A), cmlA1, floR, sul1, sul2, qnrS1, arr-3,

NA

LR697125.1

p14ARS_MMH0055-5

44,885

IncX3

blaNDM-7

KP776609.1 (45,122 bp)

LR697126

p14ARS_VSM0843-1

95,284

IncR, IncFIA(HI1)

blaNDM-1, blaCTX-M-15, blaTEM-1B, aph(3’)-VI, aph(6)-Id, aph(3″)-Ib, aph(3’)-VI, aadA1, cmlA1, sul1, sul2, arr-3

NA

LR697132

  1. The replicons and AMR genes were identified with the PlasmidFinder and ResFinder databases, respectively. The match accession indicates the accession code when at least one match of more than 90% query sequence coverage and 99% identity was found in the NCBI nucleotide database.
  2. NA not available.
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