Table 3 TCR CDR atomic contacts with peptide and MHC (percentage of contacts).

From: Structural basis for oligoclonal T cell recognition of a shared p53 cancer neoantigen

  

α chain

β chain

  

CDR1

CDR2

HV4

CDR3

CDR1

CDR2

HV4

CDR3

12-6

Peptide

0

0

0

5

0

0

0

95

 

MHC

5

42

0

30

5

3

0

13

38-10

Peptide

15

0

0

66

13

1

0

5

 

MHC

21

16

0

37

13

5

0

8

1a2

Peptide

18

0

0

21

0

2

0

59

 

MHC

22

30

0

47

0

0

0

2

  1. Contacts were calculated between non-hydrogen atoms with a 4.0 Å distance cutoff.