Table 3 Genome-wide significant associations (pDiscovery < 1.09 × 10−9) of global and regional CV.

From: Genetic correlations and genome-wide associations of cortical structure in general population samples of 22,824 adults

Lobe

Region

Locus

Position

Lead SNP

Nearest gene

Annotation

N

pDiscovery

 

Global

6q22.32

126792095

rs11759026

MIR588

Intergenic

22,410

6.31E−19

17q21.31

44790203

rs169201

NSF

Intronic

22,784

2.11E−13

17q21.32

43549608

rs149366495

PLEKHM1

Intronic

22,099

8.18E−13

12q14.3

66358347

rs1042725

HMGA2

3’UTR

22,784

7.04E−11

12q23.2

102921296

rs11111293

IGF1

Intergenic

22,784

5.45E−10

6q22

109002042

rs4945816

FOXO3

3’UTR

22,784

8.93E−10

Frontal

Superior frontal

5q14.3

92186429

rs888814

NR2F1-AS1

Intergenic

22,692

3.29E−13

Rostral middle frontal

15q14

39636227

rs17694988

C15orf54

Intergenic

22,793

3.15E−11

Caudal middle frontal

2q12.1

105460333

rs745249

LINC01158

ncRNA_intronic

22,726

2.35E−11

6q22.32

127068983

rs853974

RSPO3

Intergenic

22,351

4.82E−11

Pars opercularis

5q23.3

128734008

rs12187568

ADAMTS19

Intergenic

20,753

4.27E−18

15q14

39639898

rs4924345

C15orf54

Intergenic

22,758

1.97E−14

Pars triangularis

3q24

147106319

rs2279829

ZIC4

UTR3

22,759

3.16E−23

7q21.3

96196906

rs67055449

LOC100506136

Intergenic

22,759

4.03E−19

15q14

39633904

rs2033939

C15orf54

Intergenic

22,759

8.49E−14

7q21.3

96129071

rs62470042

C7orf76

Intronic

22,759

7.38E−13

6q15

91942761

rs12660096

MAP3K7

Intergenic

22,759

4.74E−10

Lateral orbitofrontal

14q22.2

54769839

rs6572946

CDKN3

Intergenic

22,801

2.29E−10

Precentral

15q14

39634222

rs1080066

C15orf54

Intergenic

22,699

5.84E−125

10q25.3

118648841

rs3781566

SHTN1

Intronic

22,699

4.68E−11

Temporal

Superior temporal

3q26.32

177296448

rs13084960

LINC00578

ncRNA_intronic

22,681

1.12E−11

Banksts

14q23.1

59072226

rs186347

KIAA0586

Intergenic

22,727

1.15E−15

Fusiform

14q23.1

59833172

rs1547199

DAAM1

Intronic

22,605

4.58E−10

1p33

47980916

rs6658111

FOXD2

Intergenic

22,605

7.78E−10

Transverse temporal

2q23.2

150012936

rs2046268

LYPD6B

Intronic

22,786

2.55E−12

Parahippocampal

2q33.1

199809716

rs966744

SATB2

Intergenic

22,747

2.23E−10

Parietal

Superior parietal

15q14

39633904

rs2033939

C15orf54

Intergenic

22,723

4.28E−23

16q24.2

87225139

rs4843227

LOC101928708

Intergenic

22,723

1.16E−13

19p13.2

13109763

rs68175985

NFIX

Intronic

21,777

3.27E−11

5q15

92866553

rs62369942

NR2F1-AS1

ncRNA_intronic

21,664

4.32E−10

Inferior parietal

20q13.2

52448936

rs6097618

SUMO1P1

Intergenic

22,701

2.09E−17

12q14.3

65797096

rs2336713

MSRB3

Intronic

22,701

2.47E−13

3q13.11

104724634

rs971551

ALCAM

Intergenic

22,701

2.34E−10

Supramarginal

15q14

39632013

rs71471500

THBS1

Intergenic

22,645

9.71E−28

14q23.1

59627631

rs2164950

DAAM1

Intergenic

22,645

3.59E−20

3q24

147106319

rs2279829

ZIC4

UTR3

22,645

5.36E−18

Postcentral

15q14

39633904

rs2033939

THBS1

Intergenic

22,662

4.34E−133

3q24

147106319

rs2279829

ZIC4

UTR3

22,662

2.54E−17

9q21.13

76144318

rs67286026

ANXA1

Intergenic

22,662

5.03E−11

2q36.3

226563259

rs16866701

NYAP2

Intergenic

22,545

5.69E−11

Precuneus

14q23.1

59628609

rs74826997

DAAM1

Intergenic

22,803

4.85E−20

3q28

190663557

rs35055419

OSTN

Intergenic

22,428

2.02E−10

2p22.2

37818236

rs2215605

CDC42EP3

Intergenic

22,803

3.43E−10

3q13.11

104713881

rs12495603

ALCAM

Intergenic

22,803

9.71E−10

Occipital

Lateral occipital

14q23.1

59627631

rs2164950

DAAM1

Intergenic

22,799

6.89E−16

Lingual

14q23.1

59625997

rs73313052

DAAM1

Intergenic

22,805

1.06E−20

6q22.32

127089401

rs2223739

RSPO3

Intergenic

22,805

1.75E−10

Cuneus

14q23.1

59625997

rs73313052

DAAM1

Intergenic

22,799

4.59E−43

11p15.3

12072213

rs11022131

DKK3

Intergenic

22,799

5.96E−12

13q31.1

80192236

rs9545156

LINC01068

Intergenic

22,799

4.09E−10

Pericalcarine

14q23.1

59628679

rs76341705

DAAM1

Intergenic

22,824

1.39E−29

13q31.1

80191873

rs9545155

LINC01068

intergenic

22,824

2.25E−13

11p14.1

30876113

rs273594

DCDC5

Intergenic

22,824

3.51E−13

1p13.2

113208039

rs12046466

CAPZA1

Intronic

22,824

2.36E−12

1p33

47980916

rs6658111

FOXD2

Intergenic

22,824

3.85E−11

11q22.3

104012656

rs1681464

PDGFD

Intronic

22,824

7.51E−11

6q22.32

127096181

rs9401907

RSPO3

Intergenic

22,824

2.11E−10

7p21.1

18904400

rs12700001

HDAC9

Intronic

22,824

2.12E−10

5q12.1

60315823

rs10939879

NDUFAF2

Intronic

22,824

2.92E−10

Caudal anterior cingulate

5q14.3

82852578

rs309588

VCAN

Intronic

22,748

2.60E−10

 

Insula

11q23.1

110949402

rs321403

C11orf53

Intergenic

22,543

9.58E−12

 

8q24.12

120596023

rs10283100

ENPP2

Exonic

21,481

8.29E−11