Table 1 Data collection and structure statistics for SAXS analysis.

From: Selection, biophysical and structural analysis of synthetic nanobodies that effectively neutralize SARS-CoV-2

Data collection parameters

Sb23

RBD

Sb23+RBD

Data collection parameters

Instrument

EMBL P12 (PETRA III, DESY, Hamburg)

  Beam geometry (mm2)

0.2 × 0.12

  Wavelength (nm)

0.124

  s range (nm−1)

0.03–5.0

  Exposure time (s)

4 (20 × 0.2 s)

  Temperature (K)

293

  Concentration range (mg ml−1)

0.37–4.0

Structural parameters

    Rg (nm) (from P(r))

2.2 ± 0.1

3.2 ± 0.2

3.7 ± 0.2

   Rg (nm) (from Guinier plot)

2.1 ± 0.1

3.1 ± 0.2

3.5 ± 0.2

    Dmax (nm)

8.0 ± 0.5

13 ± 1

15 ± 1

    Porod volume estimate, Vp (nm3)

20 ± 2

66 ± 2

86 ± 5

Molecular weight determination (kDa)

    From Porod volume (Vp/~1.6)

13 ± 1

37 ± 5

54 ± 3

    From consensus Bayesian assessment

15 ± 3

41 ± 1

53 ± 6

    From I(0)

21 ± 2

33 ± 9

62 ± 9

    Calculated monomeric MW from sequence

15.7

32.2

47.9

Software employed

    Primary data reduction

SASFLOW

SASFLOW

SASFLOW

    Data processing

PRIMUS

PRIMUS

PRIMUS

    Rigid body modeling

CORAL

CORAL

SASREF

    Computation of model intensities

CRYSOL

CRYSOL

CRYSOL

    3D graphics representations

PYMOL

PYMOL

PYMOL